Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC1BG036800 [ TRIDC1BG036800] |
1B | 405414513 | 405417763 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC1BG036800.10 TRIDC1BG036800.10 |
High | No | 1629 | OG0022816 | Get ORF Coding potential... Type: noncoding Potential: -0.628 Folding energies... MFEI: -24.979 AMFE: -0.670 GC content %: 37.262 | |
Tdicoccoides_TRIDC1BG036800.8 TRIDC1BG036800.8 |
High | No | 365 | OG0022816 | Get ORF Coding potential... Type: noncoding Potential: -0.275 Folding energies... MFEI: -26.164 AMFE: -0.624 GC content %: 41.918 | |
Tdicoccoides_TRIDC1BG036800.9 TRIDC1BG036800.9 |
High | No | 387 | OG0022816 | Get ORF Coding potential... Type: noncoding Potential: -0.291 Folding energies... MFEI: -26.641 AMFE: -0.640 GC content %: 41.602 |