Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC1BG054170 [ TRIDC1BG054170] |
1B | 566478489 | 566481680 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC1BG054170.1 TRIDC1BG054170.1 |
High | No | 789 | OG0061325 | Get ORF Coding potential... Type: noncoding Potential: -0.755 Folding energies... MFEI: -31.838 AMFE: -0.646 GC content %: 49.303 | |
Tdicoccoides_TRIDC1BG054170.2 TRIDC1BG054170.2 |
High | No | 515 | OG0061325 | Get ORF Coding potential... Type: noncoding Potential: -0.973 Folding energies... MFEI: -25.922 AMFE: -0.586 GC content %: 44.272 | |
Tdicoccoides_TRIDC1BG054170.4 TRIDC1BG054170.4 |
High | No | 349 | OG0354537 | Get ORF Coding potential... Type: noncoding Potential: -0.844 Folding energies... MFEI: -29.198 AMFE: -0.534 GC content %: 54.728 |