Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC2AG026920 [ TRIDC2AG026920] |
2A | 190185768 | 190194869 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC2AG026920.1 TRIDC2AG026920.1 |
High | No | 931 | OG0001242 | Get ORF Coding potential... Type: noncoding Potential: -1.063 Folding energies... MFEI: -25.124 AMFE: -0.591 GC content %: 42.535 | |
Tdicoccoides_TRIDC2AG026920.2 TRIDC2AG026920.2 |
High | No | 926 | OG0001242 | Get ORF Coding potential... Type: noncoding Potential: -1.006 Folding energies... MFEI: -24.238 AMFE: -0.536 GC content %: 45.248 | |
Tdicoccoides_TRIDC2AG026920.5 TRIDC2AG026920.5 |
High | No | 715 | OG0061406 | Get ORF Coding potential... Type: noncoding Potential: -0.972 Folding energies... MFEI: -34.531 AMFE: -0.614 GC content %: 56.224 | |
Tdicoccoides_TRIDC2AG026920.6 TRIDC2AG026920.6 |
High | No | 857 | OG0061406 | Get ORF Coding potential... Type: noncoding Potential: -1.199 Folding energies... MFEI: -29.148 AMFE: -0.568 GC content %: 51.342 | |
Tdicoccoides_TRIDC2AG026920.7 TRIDC2AG026920.7 |
High | No | 685 | OG0001242 | Get ORF Coding potential... Type: noncoding Potential: -1.001 Folding energies... MFEI: -30.788 AMFE: -0.584 GC content %: 52.701 |