Tdicoccoides TRIDC2AG038110
From GreeNC
Gene information
This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.
| Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
|---|---|---|---|---|---|---|
| Tdicoccoides_TRIDC2AG038110 [ TRIDC2AG038110] |
2A | 420787143 | 420791898 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? Yes |
Transcript features
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
| Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
|---|---|---|---|---|---|---|
| Tdicoccoides_TRIDC2AG038110.10 TRIDC2AG038110.10 |
High | No | 2879 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -0.991 Folding energies... MFEI: -24.724 AMFE: -0.613 GC content %: 40.327 | |
| Tdicoccoides_TRIDC2AG038110.11 TRIDC2AG038110.11 |
High | No | 2004 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -0.962 Folding energies... MFEI: -28.453 AMFE: -0.613 GC content %: 46.407 | |
| Tdicoccoides_TRIDC2AG038110.12 TRIDC2AG038110.12 |
High | No | 2598 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -1.212 Folding energies... MFEI: -25.481 AMFE: -0.611 GC content %: 41.686 | |
| Tdicoccoides_TRIDC2AG038110.13 TRIDC2AG038110.13 |
High | No | 2620 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -0.987 Folding energies... MFEI: -25.427 AMFE: -0.610 GC content %: 41.718 | |
| Tdicoccoides_TRIDC2AG038110.14 TRIDC2AG038110.14 |
High | No | 3017 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -1.226 Folding energies... MFEI: -25.191 AMFE: -0.610 GC content %: 41.299 | |
| Tdicoccoides_TRIDC2AG038110.16 TRIDC2AG038110.16 |
High | No | 2946 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -1.076 Folding energies... MFEI: -25.251 AMFE: -0.615 GC content %: 41.073 | |
| Tdicoccoides_TRIDC2AG038110.17 TRIDC2AG038110.17 |
High | No | 3031 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -0.993 Folding energies... MFEI: -25.269 AMFE: -0.610 GC content %: 41.405 | |
| Tdicoccoides_TRIDC2AG038110.18 TRIDC2AG038110.18 |
High | No | 2010 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -1.133 Folding energies... MFEI: -25.383 AMFE: -0.600 GC content %: 42.338 | |
| Tdicoccoides_TRIDC2AG038110.2 TRIDC2AG038110.2 |
High | No | 2681 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -1.067 Folding energies... MFEI: -25.323 AMFE: -0.602 GC content %: 42.074 | |
| Tdicoccoides_TRIDC2AG038110.20 TRIDC2AG038110.20 |
High | No | 2186 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -0.977 Folding energies... MFEI: -25.462 AMFE: -0.590 GC content %: 43.138 | |
| Tdicoccoides_TRIDC2AG038110.22 TRIDC2AG038110.22 |
High | No | 3538 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -1.239 Folding energies... MFEI: -26.015 AMFE: -0.611 GC content %: 42.595 | |
| Tdicoccoides_TRIDC2AG038110.3 TRIDC2AG038110.3 |
High | No | 2811 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -0.990 Folding energies... MFEI: -25.784 AMFE: -0.599 GC content %: 43.045 | |
| Tdicoccoides_TRIDC2AG038110.4 TRIDC2AG038110.4 |
High | No | 2195 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -1.193 Folding energies... MFEI: -25.362 AMFE: -0.592 GC content %: 42.825 | |
| Tdicoccoides_TRIDC2AG038110.5 TRIDC2AG038110.5 |
High | No | 2966 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -1.077 Folding energies... MFEI: -25.169 AMFE: -0.614 GC content %: 40.998 | |
| Tdicoccoides_TRIDC2AG038110.7 TRIDC2AG038110.7 |
High | No | 2350 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -0.981 Folding energies... MFEI: -24.596 AMFE: -0.616 GC content %: 39.957 | |
| Tdicoccoides_TRIDC2AG038110.8 TRIDC2AG038110.8 |
High | No | 1833 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -1.170 Folding energies... MFEI: -24.430 AMFE: -0.608 GC content %: 40.207 | |
| Tdicoccoides_TRIDC2AG038110.9 TRIDC2AG038110.9 |
High | No | 2114 | OG0000741 | Get ORF Coding potential... Type: noncoding Potential: -1.188 Folding energies... MFEI: -24.541 AMFE: -0.604 GC content %: 40.634 |
Gene models
Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).
