Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC2AG052480 [ TRIDC2AG052480] |
2A | 600870763 | 600876221 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC2AG052480.1 TRIDC2AG052480.1 |
High | No | 344 | OG0061458 | Get ORF Coding potential... Type: noncoding Potential: -0.937 Folding energies... MFEI: -32.762 AMFE: -0.644 GC content %: 50.872 | |
Tdicoccoides_TRIDC2AG052480.2 TRIDC2AG052480.2 |
High | No | 394 | OG0061458 | Get ORF Coding potential... Type: noncoding Potential: -0.976 Folding energies... MFEI: -31.827 AMFE: -0.637 GC content %: 50.000 | |
Tdicoccoides_TRIDC2AG052480.6 TRIDC2AG052480.6 |
High | No | 243 | OG0355597 | Get ORF Coding potential... Type: noncoding Potential: -1.058 Folding energies... MFEI: -32.140 AMFE: -0.574 GC content %: 55.967 | |
Tdicoccoides_TRIDC2AG052480.7 TRIDC2AG052480.7 |
High | No | 338 | OG0355598 | Get ORF Coding potential... Type: noncoding Potential: -1.079 Folding energies... MFEI: -31.716 AMFE: -0.613 GC content %: 51.775 | |
Tdicoccoides_TRIDC2AG052480.8 TRIDC2AG052480.8 |
High | No | 622 | OG0355599 | Get ORF Coding potential... Type: noncoding Potential: -0.746 Folding energies... MFEI: -37.058 AMFE: -0.585 GC content %: 63.344 |