Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC2BG029110 [ TRIDC2BG029110] |
2B | 212137625 | 212143100 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC2BG029110.1 TRIDC2BG029110.1 |
High | No | 4103 | OG0022911 | Get ORF Coding potential... Type: noncoding Potential: -1.104 Folding energies... MFEI: -25.791 AMFE: -0.646 GC content %: 39.946 | |
Tdicoccoides_TRIDC2BG029110.2 TRIDC2BG029110.2 |
High | No | 3872 | OG0022911 | Get ORF Coding potential... Type: noncoding Potential: -1.094 Folding energies... MFEI: -25.845 AMFE: -0.642 GC content %: 40.238 | |
Tdicoccoides_TRIDC2BG029110.4 TRIDC2BG029110.4 |
High | No | 1193 | OG0022911 | Get ORF Coding potential... Type: noncoding Potential: -1.040 Folding energies... MFEI: -30.059 AMFE: -0.638 GC content %: 47.108 |