Tdicoccoides TRIDC2BG074940
From GreeNC
Gene information
This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.
| Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
|---|---|---|---|---|---|---|
| Tdicoccoides_TRIDC2BG074940 [ TRIDC2BG074940] |
2B | 708676324 | 708682777 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? Yes |
Transcript features
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
| Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
|---|---|---|---|---|---|---|
| Tdicoccoides_TRIDC2BG074940.1 TRIDC2BG074940.1 |
High | No | 1940 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.768 Folding energies... MFEI: -32.588 AMFE: -0.663 GC content %: 49.175 | |
| Tdicoccoides_TRIDC2BG074940.10 TRIDC2BG074940.10 |
High | No | 2690 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.769 Folding energies... MFEI: -30.929 AMFE: -0.638 GC content %: 48.476 | |
| Tdicoccoides_TRIDC2BG074940.11 TRIDC2BG074940.11 |
High | No | 2903 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.746 Folding energies... MFEI: -30.868 AMFE: -0.641 GC content %: 48.157 | |
| Tdicoccoides_TRIDC2BG074940.12 TRIDC2BG074940.12 |
High | No | 2163 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.790 Folding energies... MFEI: -32.774 AMFE: -0.636 GC content %: 51.503 | |
| Tdicoccoides_TRIDC2BG074940.13 TRIDC2BG074940.13 |
High | No | 2015 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.669 Folding energies... MFEI: -33.400 AMFE: -0.643 GC content %: 51.911 | |
| Tdicoccoides_TRIDC2BG074940.14 TRIDC2BG074940.14 |
High | No | 2156 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.793 Folding energies... MFEI: -32.477 AMFE: -0.634 GC content %: 51.252 | |
| Tdicoccoides_TRIDC2BG074940.15 TRIDC2BG074940.15 |
High | No | 2866 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.852 Folding energies... MFEI: -30.677 AMFE: -0.636 GC content %: 48.221 | |
| Tdicoccoides_TRIDC2BG074940.16 TRIDC2BG074940.16 |
High | No | 2683 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.701 Folding energies... MFEI: -30.835 AMFE: -0.643 GC content %: 47.931 | |
| Tdicoccoides_TRIDC2BG074940.17 TRIDC2BG074940.17 |
High | No | 2679 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.839 Folding energies... MFEI: -30.440 AMFE: -0.637 GC content %: 47.779 | |
| Tdicoccoides_TRIDC2BG074940.19 TRIDC2BG074940.19 |
High | No | 3031 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.750 Folding energies... MFEI: -30.657 AMFE: -0.656 GC content %: 46.750 | |
| Tdicoccoides_TRIDC2BG074940.2 TRIDC2BG074940.2 |
High | No | 2847 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.781 Folding energies... MFEI: -30.611 AMFE: -0.634 GC content %: 48.296 | |
| Tdicoccoides_TRIDC2BG074940.20 TRIDC2BG074940.20 |
High | No | 2299 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.807 Folding energies... MFEI: -32.131 AMFE: -0.641 GC content %: 50.152 | |
| Tdicoccoides_TRIDC2BG074940.21 TRIDC2BG074940.21 |
High | No | 2060 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.672 Folding energies... MFEI: -32.825 AMFE: -0.639 GC content %: 51.408 | |
| Tdicoccoides_TRIDC2BG074940.22 TRIDC2BG074940.22 |
High | No | 1838 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.681 Folding energies... MFEI: -32.628 AMFE: -0.661 GC content %: 49.347 | |
| Tdicoccoides_TRIDC2BG074940.23 TRIDC2BG074940.23 |
High | No | 1835 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.698 Folding energies... MFEI: -32.981 AMFE: -0.675 GC content %: 48.883 | |
| Tdicoccoides_TRIDC2BG074940.24 TRIDC2BG074940.24 |
High | No | 2828 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.878 Folding energies... MFEI: -27.118 AMFE: -0.663 GC content %: 40.877 | |
| Tdicoccoides_TRIDC2BG074940.25 TRIDC2BG074940.25 |
High | No | 1677 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.657 Folding energies... MFEI: -33.852 AMFE: -0.672 GC content %: 50.388 | |
| Tdicoccoides_TRIDC2BG074940.26 TRIDC2BG074940.26 |
High | No | 1114 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.634 Folding energies... MFEI: -31.544 AMFE: -0.659 GC content %: 47.846 | |
| Tdicoccoides_TRIDC2BG074940.27 TRIDC2BG074940.27 |
High | No | 2417 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.729 Folding energies... MFEI: -30.865 AMFE: -0.630 GC content %: 48.986 | |
| Tdicoccoides_TRIDC2BG074940.28 TRIDC2BG074940.28 |
High | No | 1650 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.726 Folding energies... MFEI: -33.273 AMFE: -0.621 GC content %: 53.576 | |
| Tdicoccoides_TRIDC2BG074940.29 TRIDC2BG074940.29 |
High | No | 2075 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.784 Folding energies... MFEI: -31.161 AMFE: -0.654 GC content %: 47.614 | |
| Tdicoccoides_TRIDC2BG074940.3 TRIDC2BG074940.3 |
High | No | 2059 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.709 Folding energies... MFEI: -32.652 AMFE: -0.634 GC content %: 51.481 | |
| Tdicoccoides_TRIDC2BG074940.4 TRIDC2BG074940.4 |
High | No | 2844 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.744 Folding energies... MFEI: -30.833 AMFE: -0.642 GC content %: 47.996 | |
| Tdicoccoides_TRIDC2BG074940.5 TRIDC2BG074940.5 |
High | No | 2401 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.813 Folding energies... MFEI: -31.141 AMFE: -0.686 GC content %: 45.398 | |
| Tdicoccoides_TRIDC2BG074940.6 TRIDC2BG074940.6 |
High | No | 1977 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.699 Folding energies... MFEI: -32.969 AMFE: -0.638 GC content %: 51.644 | |
| Tdicoccoides_TRIDC2BG074940.7 TRIDC2BG074940.7 |
High | No | 2192 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.718 Folding energies... MFEI: -32.491 AMFE: -0.640 GC content %: 50.730 | |
| Tdicoccoides_TRIDC2BG074940.8 TRIDC2BG074940.8 |
High | No | 2487 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.731 Folding energies... MFEI: -31.492 AMFE: -0.640 GC content %: 49.216 | |
| Tdicoccoides_TRIDC2BG074940.9 TRIDC2BG074940.9 |
High | No | 2797 | OG0000232 | Get ORF Coding potential... Type: noncoding Potential: -0.847 Folding energies... MFEI: -30.704 AMFE: -0.637 GC content %: 48.230 |
Gene models
Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).
