GreeNC

Gene information

This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name	Chrom.	Start	End	Assembly	Species	Details
Tdicoccoides_TRIDC3BG050190 [ TRIDC3BG050190]	3B	552165098	552169049	v1	Triticum dicoccoides (Ensembl Plants 51)	Coding? Yes

Transcript features

This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name	Confidence	Pre-miRNA	Length	Orthologous group	Sequence	Details
Tdicoccoides_TRIDC3BG050190.1 TRIDC3BG050190.1	High	No	753	OG0009406		Get ORF Coding potential... Type: noncoding Potential: -0.601 Folding energies... MFEI: -30.452 AMFE: -0.657 GC content %: 46.348
Tdicoccoides_TRIDC3BG050190.2 TRIDC3BG050190.2	High	No	703	OG0009406		Get ORF Coding potential... Type: noncoding Potential: -0.746 Folding energies... MFEI: -25.747 AMFE: -0.635 GC content %: 40.541
Tdicoccoides_TRIDC3BG050190.3 TRIDC3BG050190.3	High	No	566	OG0009406		Get ORF Coding potential... Type: noncoding Potential: -0.568 Folding energies... MFEI: -29.682 AMFE: -0.639 GC content %: 46.466

Gene models

Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).