Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC4AG024020 [ TRIDC4AG024020] |
4A | 324498245 | 324499729 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC4AG024020.5 TRIDC4AG024020.5 |
High | No | 1266 | OG0015310 | Get ORF Coding potential... Type: noncoding Potential: -1.025 Folding energies... MFEI: -26.218 AMFE: -0.585 GC content %: 44.787 | |
Tdicoccoides_TRIDC4AG024020.6 TRIDC4AG024020.6 |
High | No | 970 | OG0015310 | Get ORF Coding potential... Type: noncoding Potential: -0.797 Folding energies... MFEI: -29.320 AMFE: -0.632 GC content %: 46.392 | |
Tdicoccoides_TRIDC4AG024020.7 TRIDC4AG024020.7 |
High | No | 1280 | OG0015310 | Get ORF Coding potential... Type: noncoding Potential: -1.026 Folding energies... MFEI: -26.109 AMFE: -0.597 GC content %: 43.750 | |
Tdicoccoides_TRIDC4AG024020.8 TRIDC4AG024020.8 |
High | No | 936 | OG0015310 | Get ORF Coding potential... Type: noncoding Potential: -0.792 Folding energies... MFEI: -28.761 AMFE: -0.615 GC content %: 46.795 |