Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC4BG013140 [ TRIDC4BG013140] |
4B | 80930832 | 80934819 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC4BG013140.5 TRIDC4BG013140.5 |
High | No | 1930 | OG0009448 | Get ORF Coding potential... Type: noncoding Potential: -1.099 Folding energies... MFEI: -24.466 AMFE: -0.636 GC content %: 38.497 | |
Tdicoccoides_TRIDC4BG013140.6 TRIDC4BG013140.6 |
High | No | 847 | OG0009448 | Get ORF Coding potential... Type: noncoding Potential: -0.855 Folding energies... MFEI: -25.915 AMFE: -0.622 GC content %: 41.677 | |
Tdicoccoides_TRIDC4BG013140.7 TRIDC4BG013140.7 |
High | No | 2438 | OG0009448 | Get ORF Coding potential... Type: noncoding Potential: -1.112 Folding energies... MFEI: -24.405 AMFE: -0.642 GC content %: 38.023 | |
Tdicoccoides_TRIDC4BG013140.8 TRIDC4BG013140.8 |
High | No | 2324 | OG0009448 | Get ORF Coding potential... Type: noncoding Potential: -1.109 Folding energies... MFEI: -24.488 AMFE: -0.644 GC content %: 38.038 | |
Tdicoccoides_TRIDC4BG013140.9 TRIDC4BG013140.9 |
High | No | 959 | OG0009448 | Get ORF Coding potential... Type: noncoding Potential: -0.947 Folding energies... MFEI: -23.754 AMFE: -0.587 GC content %: 40.459 |