GreeNC

Gene information

This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name	Chrom.	Start	End	Assembly	Species	Details
Tdicoccoides_TRIDC4BG018350 [ TRIDC4BG018350]	4B	136231307	136235326	v1	Triticum dicoccoides (Ensembl Plants 51)	Coding? Yes

Transcript features

This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name	Confidence	Pre-miRNA	Length	Orthologous group	Sequence	Details
Tdicoccoides_TRIDC4BG018350.4 TRIDC4BG018350.4	High	No	1977	OG0015331		Get ORF Coding potential... Type: noncoding Potential: -1.272 Folding energies... MFEI: -23.096 AMFE: -0.605 GC content %: 38.189
Tdicoccoides_TRIDC4BG018350.5 TRIDC4BG018350.5	High	No	855	OG0015331		Get ORF Coding potential... Type: noncoding Potential: -1.203 Folding energies... MFEI: -23.116 AMFE: -0.515 GC content %: 44.912
Tdicoccoides_TRIDC4BG018350.6 TRIDC4BG018350.6	High	No	1614	OG0015331		Get ORF Coding potential... Type: noncoding Potential: -1.260 Folding energies... MFEI: -22.534 AMFE: -0.587 GC content %: 38.414
Tdicoccoides_TRIDC4BG018350.7 TRIDC4BG018350.7	High	No	733	OG0015331		Get ORF Coding potential... Type: noncoding Potential: -1.184 Folding energies... MFEI: -24.753 AMFE: -0.537 GC content %: 46.112

Gene models

Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).