Tdicoccoides TRIDC6AG031290
From GreeNC
Gene information
This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.
| Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
|---|---|---|---|---|---|---|
| Tdicoccoides_TRIDC6AG031290 [ TRIDC6AG031290] |
6A | 345437518 | 345447091 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? Yes |
Transcript features
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
| Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
|---|---|---|---|---|---|---|
| Tdicoccoides_TRIDC6AG031290.1 TRIDC6AG031290.1 |
High | No | 1717 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.493 Folding energies... MFEI: -29.988 AMFE: -0.670 GC content %: 44.729 | |
| Tdicoccoides_TRIDC6AG031290.11 TRIDC6AG031290.11 |
High | No | 1974 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.512 Folding energies... MFEI: -29.985 AMFE: -0.667 GC content %: 44.934 | |
| Tdicoccoides_TRIDC6AG031290.12 TRIDC6AG031290.12 |
High | No | 1672 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.490 Folding energies... MFEI: -30.712 AMFE: -0.663 GC content %: 46.292 | |
| Tdicoccoides_TRIDC6AG031290.13 TRIDC6AG031290.13 |
High | No | 1697 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.387 Folding energies... MFEI: -30.519 AMFE: -0.661 GC content %: 46.199 | |
| Tdicoccoides_TRIDC6AG031290.14 TRIDC6AG031290.14 |
High | No | 1685 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.491 Folding energies... MFEI: -30.629 AMFE: -0.663 GC content %: 46.172 | |
| Tdicoccoides_TRIDC6AG031290.15 TRIDC6AG031290.15 |
High | No | 1640 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.487 Folding energies... MFEI: -31.366 AMFE: -0.677 GC content %: 46.341 | |
| Tdicoccoides_TRIDC6AG031290.16 TRIDC6AG031290.16 |
High | No | 1046 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.398 Folding energies... MFEI: -31.520 AMFE: -0.699 GC content %: 45.124 | |
| Tdicoccoides_TRIDC6AG031290.17 TRIDC6AG031290.17 |
High | No | 1645 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.710 Folding energies... MFEI: -30.736 AMFE: -0.658 GC content %: 46.687 | |
| Tdicoccoides_TRIDC6AG031290.18 TRIDC6AG031290.18 |
High | No | 683 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.690 Folding energies... MFEI: -30.688 AMFE: -0.676 GC content %: 45.388 | |
| Tdicoccoides_TRIDC6AG031290.19 TRIDC6AG031290.19 |
High | No | 1129 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.443 Folding energies... MFEI: -31.399 AMFE: -0.683 GC content %: 45.970 | |
| Tdicoccoides_TRIDC6AG031290.2 TRIDC6AG031290.2 |
High | No | 1877 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.505 Folding energies... MFEI: -29.883 AMFE: -0.669 GC content %: 44.699 | |
| Tdicoccoides_TRIDC6AG031290.20 TRIDC6AG031290.20 |
High | No | 1207 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.741 Folding energies... MFEI: -31.309 AMFE: -0.692 GC content %: 45.236 | |
| Tdicoccoides_TRIDC6AG031290.21 TRIDC6AG031290.21 |
High | No | 1215 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.451 Folding energies... MFEI: -31.160 AMFE: -0.688 GC content %: 45.267 | |
| Tdicoccoides_TRIDC6AG031290.22 TRIDC6AG031290.22 |
High | No | 1556 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.566 Folding energies... MFEI: -30.726 AMFE: -0.663 GC content %: 46.337 | |
| Tdicoccoides_TRIDC6AG031290.23 TRIDC6AG031290.23 |
High | No | 1563 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.362 Folding energies... MFEI: -30.608 AMFE: -0.655 GC content %: 46.705 | |
| Tdicoccoides_TRIDC6AG031290.24 TRIDC6AG031290.24 |
High | No | 1424 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.554 Folding energies... MFEI: -30.499 AMFE: -0.690 GC content %: 44.171 | |
| Tdicoccoides_TRIDC6AG031290.25 TRIDC6AG031290.25 |
High | No | 1582 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.568 Folding energies... MFEI: -30.784 AMFE: -0.658 GC content %: 46.776 | |
| Tdicoccoides_TRIDC6AG031290.26 TRIDC6AG031290.26 |
High | No | 1543 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.358 Folding energies... MFEI: -30.421 AMFE: -0.655 GC content %: 46.468 | |
| Tdicoccoides_TRIDC6AG031290.28 TRIDC6AG031290.28 |
High | No | 1496 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.475 Folding energies... MFEI: -31.123 AMFE: -0.674 GC content %: 46.190 | |
| Tdicoccoides_TRIDC6AG031290.29 TRIDC6AG031290.29 |
High | No | 1326 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.545 Folding energies... MFEI: -30.083 AMFE: -0.680 GC content %: 44.268 | |
| Tdicoccoides_TRIDC6AG031290.3 TRIDC6AG031290.3 |
High | No | 2022 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.515 Folding energies... MFEI: -30.188 AMFE: -0.669 GC content %: 45.104 | |
| Tdicoccoides_TRIDC6AG031290.31 TRIDC6AG031290.31 |
High | No | 1521 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.478 Folding energies... MFEI: -31.631 AMFE: -0.672 GC content %: 47.074 | |
| Tdicoccoides_TRIDC6AG031290.4 TRIDC6AG031290.4 |
High | No | 1771 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.497 Folding energies... MFEI: -30.954 AMFE: -0.665 GC content %: 46.527 | |
| Tdicoccoides_TRIDC6AG031290.6 TRIDC6AG031290.6 |
High | No | 1789 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.403 Folding energies... MFEI: -31.090 AMFE: -0.665 GC content %: 46.730 | |
| Tdicoccoides_TRIDC6AG031290.8 TRIDC6AG031290.8 |
High | No | 1940 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.509 Folding energies... MFEI: -30.216 AMFE: -0.671 GC content %: 45.052 | |
| Tdicoccoides_TRIDC6AG031290.9 TRIDC6AG031290.9 |
High | No | 1892 | OG0000037 | Get ORF Coding potential... Type: noncoding Potential: -0.728 Folding energies... MFEI: -29.947 AMFE: -0.668 GC content %: 44.820 |
Gene models
Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).
