Tdicoccoides TRIDC6BG010370
From GreeNC
Gene information
This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.
| Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
|---|---|---|---|---|---|---|
| Tdicoccoides_TRIDC6BG010370 [ TRIDC6BG010370] |
6B | 52923550 | 52934522 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? Yes |
Transcript features
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
| Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
|---|---|---|---|---|---|---|
| Tdicoccoides_TRIDC6BG010370.1 TRIDC6BG010370.1 |
High | No | 4780 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.117 Folding energies... MFEI: -28.010 AMFE: -0.670 GC content %: 41.820 | |
| Tdicoccoides_TRIDC6BG010370.10 TRIDC6BG010370.10 |
High | No | 4363 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.149 Folding energies... MFEI: -27.256 AMFE: -0.670 GC content %: 40.683 | |
| Tdicoccoides_TRIDC6BG010370.11 TRIDC6BG010370.11 |
High | No | 4266 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.148 Folding energies... MFEI: -27.283 AMFE: -0.672 GC content %: 40.624 | |
| Tdicoccoides_TRIDC6BG010370.12 TRIDC6BG010370.12 |
High | No | 4175 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.147 Folding energies... MFEI: -27.492 AMFE: -0.674 GC content %: 40.766 | |
| Tdicoccoides_TRIDC6BG010370.13 TRIDC6BG010370.13 |
High | No | 1195 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.008 Folding energies... MFEI: -28.854 AMFE: -0.652 GC content %: 44.268 | |
| Tdicoccoides_TRIDC6BG010370.14 TRIDC6BG010370.14 |
High | No | 5632 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -0.862 Folding energies... MFEI: -28.285 AMFE: -0.686 GC content %: 41.246 | |
| Tdicoccoides_TRIDC6BG010370.15 TRIDC6BG010370.15 |
High | No | 6165 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -0.867 Folding energies... MFEI: -28.133 AMFE: -0.690 GC content %: 40.779 | |
| Tdicoccoides_TRIDC6BG010370.16 TRIDC6BG010370.16 |
High | No | 5563 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -0.861 Folding energies... MFEI: -28.235 AMFE: -0.686 GC content %: 41.147 | |
| Tdicoccoides_TRIDC6BG010370.17 TRIDC6BG010370.17 |
High | No | 4301 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.149 Folding energies... MFEI: -27.266 AMFE: -0.675 GC content %: 40.386 | |
| Tdicoccoides_TRIDC6BG010370.18 TRIDC6BG010370.18 |
High | No | 4107 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.146 Folding energies... MFEI: -27.066 AMFE: -0.672 GC content %: 40.297 | |
| Tdicoccoides_TRIDC6BG010370.19 TRIDC6BG010370.19 |
High | No | 4504 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.151 Folding energies... MFEI: -27.496 AMFE: -0.676 GC content %: 40.653 | |
| Tdicoccoides_TRIDC6BG010370.20 TRIDC6BG010370.20 |
High | No | 3144 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -0.816 Folding energies... MFEI: -30.744 AMFE: -0.677 GC content %: 45.388 | |
| Tdicoccoides_TRIDC6BG010370.21 TRIDC6BG010370.21 |
High | No | 2677 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.117 Folding energies... MFEI: -26.406 AMFE: -0.658 GC content %: 40.120 | |
| Tdicoccoides_TRIDC6BG010370.22 TRIDC6BG010370.22 |
High | No | 5464 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -0.860 Folding energies... MFEI: -28.228 AMFE: -0.686 GC content %: 41.160 | |
| Tdicoccoides_TRIDC6BG010370.23 TRIDC6BG010370.23 |
High | No | 2936 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.124 Folding energies... MFEI: -26.216 AMFE: -0.655 GC content %: 40.020 | |
| Tdicoccoides_TRIDC6BG010370.24 TRIDC6BG010370.24 |
High | No | 3541 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.137 Folding energies... MFEI: -27.046 AMFE: -0.667 GC content %: 40.525 | |
| Tdicoccoides_TRIDC6BG010370.25 TRIDC6BG010370.25 |
High | No | 4617 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.152 Folding energies... MFEI: -27.433 AMFE: -0.674 GC content %: 40.697 | |
| Tdicoccoides_TRIDC6BG010370.26 TRIDC6BG010370.26 |
High | No | 4901 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.155 Folding energies... MFEI: -27.121 AMFE: -0.680 GC content %: 39.910 | |
| Tdicoccoides_TRIDC6BG010370.27 TRIDC6BG010370.27 |
High | No | 4601 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.152 Folding energies... MFEI: -27.427 AMFE: -0.677 GC content %: 40.491 | |
| Tdicoccoides_TRIDC6BG010370.28 TRIDC6BG010370.28 |
High | No | 4893 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.155 Folding energies... MFEI: -27.149 AMFE: -0.680 GC content %: 39.914 | |
| Tdicoccoides_TRIDC6BG010370.29 TRIDC6BG010370.29 |
High | No | 4720 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.153 Folding energies... MFEI: -27.441 AMFE: -0.680 GC content %: 40.339 | |
| Tdicoccoides_TRIDC6BG010370.3 TRIDC6BG010370.3 |
High | No | 4705 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.153 Folding energies... MFEI: -27.441 AMFE: -0.671 GC content %: 40.871 | |
| Tdicoccoides_TRIDC6BG010370.30 TRIDC6BG010370.30 |
High | No | 4720 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.153 Folding energies... MFEI: -27.547 AMFE: -0.682 GC content %: 40.403 | |
| Tdicoccoides_TRIDC6BG010370.31 TRIDC6BG010370.31 |
High | No | 4485 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.151 Folding energies... MFEI: -27.565 AMFE: -0.681 GC content %: 40.491 | |
| Tdicoccoides_TRIDC6BG010370.32 TRIDC6BG010370.32 |
High | No | 4820 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -0.852 Folding energies... MFEI: -28.328 AMFE: -0.680 GC content %: 41.680 | |
| Tdicoccoides_TRIDC6BG010370.33 TRIDC6BG010370.33 |
High | No | 4427 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.150 Folding energies... MFEI: -26.487 AMFE: -0.674 GC content %: 39.327 | |
| Tdicoccoides_TRIDC6BG010370.34 TRIDC6BG010370.34 |
High | No | 4877 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.155 Folding energies... MFEI: -27.515 AMFE: -0.687 GC content %: 40.025 | |
| Tdicoccoides_TRIDC6BG010370.35 TRIDC6BG010370.35 |
High | No | 4799 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.154 Folding energies... MFEI: -27.402 AMFE: -0.686 GC content %: 39.967 | |
| Tdicoccoides_TRIDC6BG010370.36 TRIDC6BG010370.36 |
High | No | 4633 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.152 Folding energies... MFEI: -27.442 AMFE: -0.685 GC content %: 40.060 | |
| Tdicoccoides_TRIDC6BG010370.37 TRIDC6BG010370.37 |
High | No | 4716 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.153 Folding energies... MFEI: -27.241 AMFE: -0.684 GC content %: 39.801 | |
| Tdicoccoides_TRIDC6BG010370.38 TRIDC6BG010370.38 |
High | No | 4752 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.154 Folding energies... MFEI: -27.254 AMFE: -0.686 GC content %: 39.710 | |
| Tdicoccoides_TRIDC6BG010370.39 TRIDC6BG010370.39 |
High | No | 4915 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -0.853 Folding energies... MFEI: -28.177 AMFE: -0.682 GC content %: 41.343 | |
| Tdicoccoides_TRIDC6BG010370.4 TRIDC6BG010370.4 |
High | No | 4629 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.152 Folding energies... MFEI: -27.781 AMFE: -0.669 GC content %: 41.542 | |
| Tdicoccoides_TRIDC6BG010370.40 TRIDC6BG010370.40 |
High | No | 3854 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.142 Folding energies... MFEI: -26.702 AMFE: -0.670 GC content %: 39.829 | |
| Tdicoccoides_TRIDC6BG010370.41 TRIDC6BG010370.41 |
High | No | 4521 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.151 Folding energies... MFEI: -27.074 AMFE: -0.677 GC content %: 40.013 | |
| Tdicoccoides_TRIDC6BG010370.42 TRIDC6BG010370.42 |
High | No | 4268 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.148 Folding energies... MFEI: -26.570 AMFE: -0.677 GC content %: 39.222 | |
| Tdicoccoides_TRIDC6BG010370.43 TRIDC6BG010370.43 |
High | No | 4627 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.152 Folding energies... MFEI: -27.005 AMFE: -0.676 GC content %: 39.939 | |
| Tdicoccoides_TRIDC6BG010370.44 TRIDC6BG010370.44 |
High | No | 4391 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.150 Folding energies... MFEI: -26.461 AMFE: -0.679 GC content %: 38.943 | |
| Tdicoccoides_TRIDC6BG010370.45 TRIDC6BG010370.45 |
High | No | 4700 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -0.850 Folding energies... MFEI: -27.853 AMFE: -0.684 GC content %: 40.723 | |
| Tdicoccoides_TRIDC6BG010370.46 TRIDC6BG010370.46 |
High | No | 4338 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.149 Folding energies... MFEI: -26.745 AMFE: -0.675 GC content %: 39.650 | |
| Tdicoccoides_TRIDC6BG010370.47 TRIDC6BG010370.47 |
High | No | 4120 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.146 Folding energies... MFEI: -26.374 AMFE: -0.680 GC content %: 38.786 | |
| Tdicoccoides_TRIDC6BG010370.48 TRIDC6BG010370.48 |
High | No | 4441 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.150 Folding energies... MFEI: -27.185 AMFE: -0.685 GC content %: 39.676 | |
| Tdicoccoides_TRIDC6BG010370.49 TRIDC6BG010370.49 |
High | No | 3591 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.138 Folding energies... MFEI: -26.291 AMFE: -0.671 GC content %: 39.209 | |
| Tdicoccoides_TRIDC6BG010370.5 TRIDC6BG010370.5 |
High | No | 4613 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.152 Folding energies... MFEI: -27.830 AMFE: -0.668 GC content %: 41.643 | |
| Tdicoccoides_TRIDC6BG010370.50 TRIDC6BG010370.50 |
High | No | 3362 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.134 Folding energies... MFEI: -26.333 AMFE: -0.670 GC content %: 39.322 | |
| Tdicoccoides_TRIDC6BG010370.51 TRIDC6BG010370.51 |
High | No | 2487 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.110 Folding energies... MFEI: -24.926 AMFE: -0.657 GC content %: 37.917 | |
| Tdicoccoides_TRIDC6BG010370.52 TRIDC6BG010370.52 |
High | No | 3358 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -0.793 Folding energies... MFEI: -26.825 AMFE: -0.660 GC content %: 40.619 | |
| Tdicoccoides_TRIDC6BG010370.53 TRIDC6BG010370.53 |
High | No | 3354 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -0.793 Folding energies... MFEI: -27.078 AMFE: -0.665 GC content %: 40.698 | |
| Tdicoccoides_TRIDC6BG010370.54 TRIDC6BG010370.54 |
High | No | 3297 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.132 Folding energies... MFEI: -26.415 AMFE: -0.666 GC content %: 39.642 | |
| Tdicoccoides_TRIDC6BG010370.55 TRIDC6BG010370.55 |
High | No | 2455 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.109 Folding energies... MFEI: -26.403 AMFE: -0.676 GC content %: 39.063 | |
| Tdicoccoides_TRIDC6BG010370.56 TRIDC6BG010370.56 |
High | No | 2486 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.110 Folding energies... MFEI: -26.191 AMFE: -0.669 GC content %: 39.139 | |
| Tdicoccoides_TRIDC6BG010370.57 TRIDC6BG010370.57 |
High | No | 2255 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.101 Folding energies... MFEI: -25.268 AMFE: -0.674 GC content %: 37.472 | |
| Tdicoccoides_TRIDC6BG010370.58 TRIDC6BG010370.58 |
High | No | 1381 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -0.695 Folding energies... MFEI: -31.108 AMFE: -0.681 GC content %: 45.692 | |
| Tdicoccoides_TRIDC6BG010370.6 TRIDC6BG010370.6 |
High | No | 4347 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.149 Folding energies... MFEI: -27.407 AMFE: -0.667 GC content %: 41.063 | |
| Tdicoccoides_TRIDC6BG010370.7 TRIDC6BG010370.7 |
High | No | 4127 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.146 Folding energies... MFEI: -27.497 AMFE: -0.667 GC content %: 41.216 | |
| Tdicoccoides_TRIDC6BG010370.8 TRIDC6BG010370.8 |
High | No | 4124 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.146 Folding energies... MFEI: -27.447 AMFE: -0.665 GC content %: 41.271 | |
| Tdicoccoides_TRIDC6BG010370.9 TRIDC6BG010370.9 |
High | No | 4369 | OG0000023 | Get ORF Coding potential... Type: noncoding Potential: -1.149 Folding energies... MFEI: -27.629 AMFE: -0.675 GC content %: 40.902 |
Gene models
Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).
