Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC7AG026240 [ TRIDC7AG026240] |
7A | 168565651 | 168569391 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC7AG026240.10 TRIDC7AG026240.10 |
High | No | 1770 | OG0003603 | Get ORF Coding potential... Type: noncoding Potential: -0.999 Folding energies... MFEI: -32.068 AMFE: -0.661 GC content %: 48.531 | |
Tdicoccoides_TRIDC7AG026240.12 TRIDC7AG026240.12 |
High | No | 1822 | OG0003603 | Get ORF Coding potential... Type: noncoding Potential: -1.003 Folding energies... MFEI: -31.992 AMFE: -0.665 GC content %: 48.134 | |
Tdicoccoides_TRIDC7AG026240.13 TRIDC7AG026240.13 |
High | No | 1911 | OG0003603 | Get ORF Coding potential... Type: noncoding Potential: -1.009 Folding energies... MFEI: -31.303 AMFE: -0.671 GC content %: 46.677 | |
Tdicoccoides_TRIDC7AG026240.2 TRIDC7AG026240.2 |
High | No | 2242 | OG0003603 | Get ORF Coding potential... Type: noncoding Potential: -1.027 Folding energies... MFEI: -31.641 AMFE: -0.665 GC content %: 47.591 | |
Tdicoccoides_TRIDC7AG026240.5 TRIDC7AG026240.5 |
High | No | 2106 | OG0003603 | Get ORF Coding potential... Type: noncoding Potential: -1.020 Folding energies... MFEI: -32.816 AMFE: -0.668 GC content %: 49.098 | |
Tdicoccoides_TRIDC7AG026240.6 TRIDC7AG026240.6 |
High | No | 1635 | OG0003603 | Get ORF Coding potential... Type: noncoding Potential: -1.024 Folding energies... MFEI: -31.872 AMFE: -0.647 GC content %: 49.297 | |
Tdicoccoides_TRIDC7AG026240.7 TRIDC7AG026240.7 |
High | No | 1553 | OG0003603 | Get ORF Coding potential... Type: noncoding Potential: -0.981 Folding energies... MFEI: -29.981 AMFE: -0.651 GC content %: 46.040 | |
Tdicoccoides_TRIDC7AG026240.9 TRIDC7AG026240.9 |
High | No | 1810 | OG0003603 | Get ORF Coding potential... Type: noncoding Potential: -1.002 Folding energies... MFEI: -32.199 AMFE: -0.663 GC content %: 48.564 |