Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC7AG052590 [ TRIDC7AG052590] |
7A | 547515651 | 547516723 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC7AG052590.1 TRIDC7AG052590.1 |
High | No | 202 | OG0366661 | Get ORF Coding potential... Type: noncoding Potential: -1.277 Folding energies... MFEI: -32.921 AMFE: -0.478 GC content %: 68.812 | |
Tdicoccoides_TRIDC7AG052590.2 TRIDC7AG052590.2 |
High | No | 604 | OG0007121 | Get ORF Coding potential... Type: noncoding Potential: -0.671 Folding energies... MFEI: -50.000 AMFE: -0.679 GC content %: 73.675 | |
Tdicoccoides_TRIDC7AG052590.3 TRIDC7AG052590.3 |
High | No | 481 | OG0007121 | Get ORF Coding potential... Type: noncoding Potential: -0.537 Folding energies... MFEI: -50.291 AMFE: -0.668 GC content %: 75.260 | |
Tdicoccoides_TRIDC7AG052590.4 TRIDC7AG052590.4 |
High | No | 396 | OG0007121 | Get ORF Coding potential... Type: noncoding Potential: -0.659 Folding energies... MFEI: -54.823 AMFE: -0.719 GC content %: 76.263 | |
Tdicoccoides_TRIDC7AG052590.5 TRIDC7AG052590.5 |
High | No | 410 | OG0366662 | Get ORF Coding potential... Type: noncoding Potential: -1.400 Folding energies... MFEI: -28.073 AMFE: -0.533 GC content %: 52.683 |