Tdicoccoides TRIDC7AG056870
From GreeNC
Gene information
This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.
| Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
|---|---|---|---|---|---|---|
| Tdicoccoides_TRIDC7AG056870 [ TRIDC7AG056870] |
7A | 590426753 | 590442024 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? No |
Transcript features
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
| Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
|---|---|---|---|---|---|---|
| Tdicoccoides_TRIDC7AG056870.1 TRIDC7AG056870.1 |
High | No | 1633 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.814 Folding energies... MFEI: -32.609 AMFE: -0.699 GC content %: 46.663 | |
| Tdicoccoides_TRIDC7AG056870.10 TRIDC7AG056870.10 |
High | No | 2363 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.882 Folding energies... MFEI: -32.336 AMFE: -0.697 GC content %: 46.424 | |
| Tdicoccoides_TRIDC7AG056870.11 TRIDC7AG056870.11 |
High | No | 2539 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.896 Folding energies... MFEI: -31.887 AMFE: -0.694 GC content %: 45.924 | |
| Tdicoccoides_TRIDC7AG056870.12 TRIDC7AG056870.12 |
High | No | 2589 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.689 Folding energies... MFEI: -31.244 AMFE: -0.667 GC content %: 46.813 | |
| Tdicoccoides_TRIDC7AG056870.13 TRIDC7AG056870.13 |
High | No | 2513 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.894 Folding energies... MFEI: -31.735 AMFE: -0.673 GC content %: 47.155 | |
| Tdicoccoides_TRIDC7AG056870.14 TRIDC7AG056870.14 |
High | No | 2066 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.832 Folding energies... MFEI: -33.015 AMFE: -0.673 GC content %: 49.032 | |
| Tdicoccoides_TRIDC7AG056870.15 TRIDC7AG056870.15 |
High | No | 2071 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.847 Folding energies... MFEI: -32.936 AMFE: -0.671 GC content %: 49.058 | |
| Tdicoccoides_TRIDC7AG056870.16 TRIDC7AG056870.16 |
High | No | 2699 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.908 Folding energies... MFEI: -31.375 AMFE: -0.673 GC content %: 46.610 | |
| Tdicoccoides_TRIDC7AG056870.17 TRIDC7AG056870.17 |
High | No | 1970 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.730 Folding energies... MFEI: -32.944 AMFE: -0.669 GC content %: 49.239 | |
| Tdicoccoides_TRIDC7AG056870.18 TRIDC7AG056870.18 |
High | No | 1994 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.844 Folding energies... MFEI: -33.225 AMFE: -0.673 GC content %: 49.398 | |
| Tdicoccoides_TRIDC7AG056870.19 TRIDC7AG056870.19 |
High | No | 1462 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.817 Folding energies... MFEI: -36.300 AMFE: -0.696 GC content %: 52.120 | |
| Tdicoccoides_TRIDC7AG056870.2 TRIDC7AG056870.2 |
High | No | 2305 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.877 Folding energies... MFEI: -30.885 AMFE: -0.694 GC content %: 44.512 | |
| Tdicoccoides_TRIDC7AG056870.20 TRIDC7AG056870.20 |
High | No | 1379 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.811 Folding energies... MFEI: -35.925 AMFE: -0.692 GC content %: 51.922 | |
| Tdicoccoides_TRIDC7AG056870.21 TRIDC7AG056870.21 |
High | No | 1389 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.942 Folding energies... MFEI: -29.986 AMFE: -0.688 GC content %: 43.557 | |
| Tdicoccoides_TRIDC7AG056870.22 TRIDC7AG056870.22 |
High | No | 1796 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.722 Folding energies... MFEI: -33.441 AMFE: -0.661 GC content %: 50.557 | |
| Tdicoccoides_TRIDC7AG056870.23 TRIDC7AG056870.23 |
High | No | 2629 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.903 Folding energies... MFEI: -27.547 AMFE: -0.683 GC content %: 40.320 | |
| Tdicoccoides_TRIDC7AG056870.24 TRIDC7AG056870.24 |
High | No | 1666 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.648 Folding energies... MFEI: -34.418 AMFE: -0.679 GC content %: 50.720 | |
| Tdicoccoides_TRIDC7AG056870.25 TRIDC7AG056870.25 |
High | No | 1283 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.803 Folding energies... MFEI: -28.122 AMFE: -0.672 GC content %: 41.855 | |
| Tdicoccoides_TRIDC7AG056870.26 TRIDC7AG056870.26 |
High | No | 2397 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.680 Folding energies... MFEI: -31.890 AMFE: -0.671 GC content %: 47.559 | |
| Tdicoccoides_TRIDC7AG056870.27 TRIDC7AG056870.27 |
High | No | 2018 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.848 Folding energies... MFEI: -32.190 AMFE: -0.701 GC content %: 45.937 | |
| Tdicoccoides_TRIDC7AG056870.28 TRIDC7AG056870.28 |
High | No | 2040 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.825 Folding energies... MFEI: -28.926 AMFE: -0.693 GC content %: 41.765 | |
| Tdicoccoides_TRIDC7AG056870.29 TRIDC7AG056870.29 |
High | No | 1454 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.702 Folding energies... MFEI: -33.466 AMFE: -0.703 GC content %: 47.593 | |
| Tdicoccoides_TRIDC7AG056870.3 TRIDC7AG056870.3 |
High | No | 2422 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.887 Folding energies... MFEI: -30.599 AMFE: -0.695 GC content %: 44.055 | |
| Tdicoccoides_TRIDC7AG056870.4 TRIDC7AG056870.4 |
High | No | 1554 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.708 Folding energies... MFEI: -35.161 AMFE: -0.686 GC content %: 51.287 | |
| Tdicoccoides_TRIDC7AG056870.5 TRIDC7AG056870.5 |
High | No | 2052 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.734 Folding energies... MFEI: -32.714 AMFE: -0.667 GC content %: 49.025 | |
| Tdicoccoides_TRIDC7AG056870.6 TRIDC7AG056870.6 |
High | No | 1897 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.833 Folding energies... MFEI: -27.670 AMFE: -0.666 GC content %: 41.539 | |
| Tdicoccoides_TRIDC7AG056870.7 TRIDC7AG056870.7 |
High | No | 1221 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.798 Folding energies... MFEI: -28.550 AMFE: -0.658 GC content %: 43.407 | |
| Tdicoccoides_TRIDC7AG056870.8 TRIDC7AG056870.8 |
High | No | 1261 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.726 Folding energies... MFEI: -28.565 AMFE: -0.660 GC content %: 43.299 | |
| Tdicoccoides_TRIDC7AG056870.9 TRIDC7AG056870.9 |
High | No | 1906 | OG0000223 | Get ORF Coding potential... Type: noncoding Potential: -0.841 Folding energies... MFEI: -33.825 AMFE: -0.700 GC content %: 48.321 |
Gene models
Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).
