Tdicoccoides TRIDC7AG063940
From GreeNC
Gene information
This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.
| Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
|---|---|---|---|---|---|---|
| Tdicoccoides_TRIDC7AG063940 [ TRIDC7AG063940] |
7A | 651379241 | 651384917 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? No |
Transcript features
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
| Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
|---|---|---|---|---|---|---|
| Tdicoccoides_TRIDC7AG063940.1 TRIDC7AG063940.1 |
High | No | 4978 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.932 Folding energies... MFEI: -28.457 AMFE: -0.663 GC content %: 42.949 | |
| Tdicoccoides_TRIDC7AG063940.10 TRIDC7AG063940.10 |
High | No | 3989 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.922 Folding energies... MFEI: -29.022 AMFE: -0.657 GC content %: 44.171 | |
| Tdicoccoides_TRIDC7AG063940.11 TRIDC7AG063940.11 |
High | No | 3665 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.918 Folding energies... MFEI: -29.476 AMFE: -0.654 GC content %: 45.048 | |
| Tdicoccoides_TRIDC7AG063940.12 TRIDC7AG063940.12 |
High | No | 3508 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.915 Folding energies... MFEI: -30.388 AMFE: -0.667 GC content %: 45.553 | |
| Tdicoccoides_TRIDC7AG063940.13 TRIDC7AG063940.13 |
High | No | 2167 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.881 Folding energies... MFEI: -31.652 AMFE: -0.654 GC content %: 48.408 | |
| Tdicoccoides_TRIDC7AG063940.14 TRIDC7AG063940.14 |
High | No | 4018 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.922 Folding energies... MFEI: -29.131 AMFE: -0.666 GC content %: 43.728 | |
| Tdicoccoides_TRIDC7AG063940.15 TRIDC7AG063940.15 |
High | No | 3704 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.918 Folding energies... MFEI: -29.120 AMFE: -0.656 GC content %: 44.411 | |
| Tdicoccoides_TRIDC7AG063940.16 TRIDC7AG063940.16 |
High | No | 4069 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.923 Folding energies... MFEI: -29.317 AMFE: -0.663 GC content %: 44.212 | |
| Tdicoccoides_TRIDC7AG063940.17 TRIDC7AG063940.17 |
High | No | 2356 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.888 Folding energies... MFEI: -31.210 AMFE: -0.661 GC content %: 47.241 | |
| Tdicoccoides_TRIDC7AG063940.18 TRIDC7AG063940.18 |
High | No | 3340 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.912 Folding energies... MFEI: -30.105 AMFE: -0.659 GC content %: 45.659 | |
| Tdicoccoides_TRIDC7AG063940.19 TRIDC7AG063940.19 |
High | No | 3038 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.906 Folding energies... MFEI: -30.583 AMFE: -0.664 GC content %: 46.083 | |
| Tdicoccoides_TRIDC7AG063940.2 TRIDC7AG063940.2 |
High | No | 3177 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.909 Folding energies... MFEI: -30.850 AMFE: -0.658 GC content %: 46.900 | |
| Tdicoccoides_TRIDC7AG063940.20 TRIDC7AG063940.20 |
High | No | 1884 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.868 Folding energies... MFEI: -31.465 AMFE: -0.659 GC content %: 47.771 | |
| Tdicoccoides_TRIDC7AG063940.21 TRIDC7AG063940.21 |
High | No | 3646 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.917 Folding energies... MFEI: -29.608 AMFE: -0.663 GC content %: 44.624 | |
| Tdicoccoides_TRIDC7AG063940.22 TRIDC7AG063940.22 |
High | No | 1999 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.874 Folding energies... MFEI: -31.391 AMFE: -0.648 GC content %: 48.424 | |
| Tdicoccoides_TRIDC7AG063940.23 TRIDC7AG063940.23 |
High | No | 3730 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.918 Folding energies... MFEI: -29.405 AMFE: -0.662 GC content %: 44.397 | |
| Tdicoccoides_TRIDC7AG063940.24 TRIDC7AG063940.24 |
High | No | 4554 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.929 Folding energies... MFEI: -28.364 AMFE: -0.659 GC content %: 43.039 | |
| Tdicoccoides_TRIDC7AG063940.25 TRIDC7AG063940.25 |
High | No | 1989 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.873 Folding energies... MFEI: -32.016 AMFE: -0.650 GC content %: 49.271 | |
| Tdicoccoides_TRIDC7AG063940.26 TRIDC7AG063940.26 |
High | No | 4281 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.926 Folding energies... MFEI: -28.911 AMFE: -0.665 GC content %: 43.471 | |
| Tdicoccoides_TRIDC7AG063940.27 TRIDC7AG063940.27 |
High | No | 3641 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.917 Folding energies... MFEI: -28.629 AMFE: -0.661 GC content %: 43.285 | |
| Tdicoccoides_TRIDC7AG063940.28 TRIDC7AG063940.28 |
High | No | 2871 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.902 Folding energies... MFEI: -29.119 AMFE: -0.656 GC content %: 44.375 | |
| Tdicoccoides_TRIDC7AG063940.29 TRIDC7AG063940.29 |
High | No | 3387 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.913 Folding energies... MFEI: -28.093 AMFE: -0.656 GC content %: 42.811 | |
| Tdicoccoides_TRIDC7AG063940.3 TRIDC7AG063940.3 |
High | No | 2587 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.895 Folding energies... MFEI: -31.500 AMFE: -0.668 GC content %: 47.159 | |
| Tdicoccoides_TRIDC7AG063940.30 TRIDC7AG063940.30 |
High | No | 3097 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.907 Folding energies... MFEI: -28.356 AMFE: -0.653 GC content %: 43.397 | |
| Tdicoccoides_TRIDC7AG063940.31 TRIDC7AG063940.31 |
High | No | 2230 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.883 Folding energies... MFEI: -28.691 AMFE: -0.658 GC content %: 43.632 | |
| Tdicoccoides_TRIDC7AG063940.32 TRIDC7AG063940.32 |
High | No | 2688 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.898 Folding energies... MFEI: -28.248 AMFE: -0.634 GC content %: 44.531 | |
| Tdicoccoides_TRIDC7AG063940.4 TRIDC7AG063940.4 |
High | No | 2452 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.891 Folding energies... MFEI: -30.479 AMFE: -0.648 GC content %: 47.064 | |
| Tdicoccoides_TRIDC7AG063940.5 TRIDC7AG063940.5 |
High | No | 3243 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.910 Folding energies... MFEI: -30.755 AMFE: -0.659 GC content %: 46.654 | |
| Tdicoccoides_TRIDC7AG063940.6 TRIDC7AG063940.6 |
High | No | 3106 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.908 Folding energies... MFEI: -30.953 AMFE: -0.656 GC content %: 47.199 | |
| Tdicoccoides_TRIDC7AG063940.7 TRIDC7AG063940.7 |
High | No | 3009 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.906 Folding energies... MFEI: -30.555 AMFE: -0.644 GC content %: 47.424 | |
| Tdicoccoides_TRIDC7AG063940.8 TRIDC7AG063940.8 |
High | No | 3136 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.908 Folding energies... MFEI: -30.835 AMFE: -0.654 GC content %: 47.130 | |
| Tdicoccoides_TRIDC7AG063940.9 TRIDC7AG063940.9 |
High | No | 3216 | OG0000158 | Get ORF Coding potential... Type: noncoding Potential: -0.910 Folding energies... MFEI: -31.244 AMFE: -0.667 GC content %: 46.828 |
Gene models
Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).
