Tdicoccoides TRIDC7AG066690
From GreeNC
Gene information
This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.
| Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
|---|---|---|---|---|---|---|
| Tdicoccoides_TRIDC7AG066690 [ TRIDC7AG066690] |
7A | 667325997 | 667330099 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? Yes |
Transcript features
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
| Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
|---|---|---|---|---|---|---|
| Tdicoccoides_TRIDC7AG066690.1 TRIDC7AG066690.1 |
High | No | 341 | OG0366845 | Get ORF Coding potential... Type: noncoding Potential: -0.948 Folding energies... MFEI: -36.276 AMFE: -0.567 GC content %: 63.930 | |
| Tdicoccoides_TRIDC7AG066690.10 TRIDC7AG066690.10 |
High | No | 1976 | OG0000752 | Get ORF Coding potential... Type: noncoding Potential: -0.363 Folding energies... MFEI: -28.477 AMFE: -0.654 GC content %: 43.573 | |
| Tdicoccoides_TRIDC7AG066690.11 TRIDC7AG066690.11 |
High | No | 1364 | OG0000752 | Get ORF Coding potential... Type: noncoding Potential: -0.247 Folding energies... MFEI: -25.572 AMFE: -0.634 GC content %: 40.323 | |
| Tdicoccoides_TRIDC7AG066690.12 TRIDC7AG066690.12 |
High | No | 1336 | OG0000752 | Get ORF Coding potential... Type: noncoding Potential: -0.927 Folding energies... MFEI: -28.189 AMFE: -0.613 GC content %: 45.958 | |
| Tdicoccoides_TRIDC7AG066690.13 TRIDC7AG066690.13 |
Low | No | 1611 | OG0000752 | Get ORF Coding potential... Type: coding Potential: 0.225 Folding energies... MFEI: -26.027 AMFE: -0.648 GC content %: 40.161 | |
| Tdicoccoides_TRIDC7AG066690.14 TRIDC7AG066690.14 |
Low | No | 1432 | OG0000752 | Get ORF Coding potential... Type: coding Potential: 0.240 Folding energies... MFEI: -25.901 AMFE: -0.636 GC content %: 40.712 | |
| Tdicoccoides_TRIDC7AG066690.19 TRIDC7AG066690.19 |
High | No | 1950 | OG0000752 | Get ORF Coding potential... Type: noncoding Potential: -0.258 Folding energies... MFEI: -28.379 AMFE: -0.647 GC content %: 43.846 | |
| Tdicoccoides_TRIDC7AG066690.2 TRIDC7AG066690.2 |
High | No | 2273 | OG0000752 | Get ORF Coding potential... Type: noncoding Potential: -0.343 Folding energies... MFEI: -28.192 AMFE: -0.656 GC content %: 42.983 | |
| Tdicoccoides_TRIDC7AG066690.20 TRIDC7AG066690.20 |
Low | No | 1545 | OG0000752 | Get ORF Coding potential... Type: coding Potential: 0.231 Folding energies... MFEI: -26.343 AMFE: -0.663 GC content %: 39.741 | |
| Tdicoccoides_TRIDC7AG066690.23 TRIDC7AG066690.23 |
High | No | 1637 | OG0000752 | Get ORF Coding potential... Type: noncoding Potential: -0.262 Folding energies... MFEI: -29.224 AMFE: -0.644 GC content %: 45.388 | |
| Tdicoccoides_TRIDC7AG066690.24 TRIDC7AG066690.24 |
High | No | 1335 | OG0000752 | Get ORF Coding potential... Type: noncoding Potential: -0.244 Folding energies... MFEI: -26.165 AMFE: -0.646 GC content %: 40.524 | |
| Tdicoccoides_TRIDC7AG066690.25 TRIDC7AG066690.25 |
High | No | 1917 | OG0000752 | Get ORF Coding potential... Type: noncoding Potential: -0.282 Folding energies... MFEI: -28.623 AMFE: -0.663 GC content %: 43.192 | |
| Tdicoccoides_TRIDC7AG066690.26 TRIDC7AG066690.26 |
High | No | 2070 | OG0000752 | Get ORF Coding potential... Type: noncoding Potential: -0.292 Folding energies... MFEI: -28.498 AMFE: -0.674 GC content %: 42.271 | |
| Tdicoccoides_TRIDC7AG066690.27 TRIDC7AG066690.27 |
High | No | 1805 | OG0000752 | Get ORF Coding potential... Type: noncoding Potential: -0.312 Folding energies... MFEI: -28.864 AMFE: -0.660 GC content %: 43.712 | |
| Tdicoccoides_TRIDC7AG066690.5 TRIDC7AG066690.5 |
High | No | 1931 | OG0000752 | Get ORF Coding potential... Type: noncoding Potential: -0.360 Folding energies... MFEI: -27.903 AMFE: -0.626 GC content %: 44.588 | |
| Tdicoccoides_TRIDC7AG066690.6 TRIDC7AG066690.6 |
High | No | 2043 | OG0000752 | Get ORF Coding potential... Type: noncoding Potential: -0.329 Folding energies... MFEI: -28.042 AMFE: -0.638 GC content %: 43.955 | |
| Tdicoccoides_TRIDC7AG066690.7 TRIDC7AG066690.7 |
High | No | 1736 | OG0000752 | Get ORF Coding potential... Type: noncoding Potential: -0.244 Folding energies... MFEI: -28.520 AMFE: -0.632 GC content %: 45.104 | |
| Tdicoccoides_TRIDC7AG066690.8 TRIDC7AG066690.8 |
Low | No | 1321 | OG0000752 | Get ORF Coding potential... Type: coding Potential: 0.212 Folding energies... MFEI: -26.631 AMFE: -0.649 GC content %: 41.030 |
Gene models
Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).
