Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC7AG074120 [ TRIDC7AG074120] |
7A | 703298968 | 703300788 | v1 | Triticum dicoccoides (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Tdicoccoides_TRIDC7AG074120.1 TRIDC7AG074120.1 |
Low | No | 1471 | OG0062841 | Get ORF Coding potential... Type: noncoding Potential: -0.382 Folding energies... MFEI: -28.464 AMFE: -0.696 GC content %: 40.925 | |
Tdicoccoides_TRIDC7AG074120.2 TRIDC7AG074120.2 |
High | No | 1260 | OG0062841 | Get ORF Coding potential... Type: noncoding Potential: -0.365 Folding energies... MFEI: -29.698 AMFE: -0.690 GC content %: 43.016 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Tdicoccoides_TRIDC7AG074120.1 | SwissProt | 2021-04-01 | Q93ZX6 | 5.06e-4 |