Tturgidum TRITD3Av1G040140

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Tturgidum_TRITD3Av1G040140
[ TRITD3Av1G040140]
3A 88604190 88605456 v1 Triticum turgidum (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Tturgidum_TRITD3Av1G040140.1
TRITD3Av1G040140.1
High No 279 OG0371133
Coding potential...
Type: noncoding Potential: -1.040
Folding energies...
MFEI: -50.251 AMFE: -0.677
GC content
%: 74.194
Tturgidum_TRITD3Av1G040140.2
TRITD3Av1G040140.2
High No 225 OG0371134
Coding potential...
Type: noncoding Potential: -0.968
Folding energies...
MFEI: -44.000 AMFE: -0.611
GC content
%: 72.000


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Tturgidum_TRITD3Av1G040140.png