Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Vangularis_LR48_Vigan09g178300 [ LR48_Vigan09g178300] |
9 | 22901175 | 22901498 | v1.1 | Vigna angularis (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Vangularis_KOM53124 KOM53124 |
Low | No | 324 | OG0377985 | Get ORF Coding potential... Type: noncoding Potential: -0.794 Folding energies... MFEI: -15.216 AMFE: -0.329 GC content %: 46.296 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vangularis_KOM53124 | SwissProt | 2021-04-01 | Q9FZE4 | 4.59e-13 |