Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Vunguiculata_Vigun09g008100 [ Vigun09g008100] |
Vu09 | 629601 | 632341 | v1.1 | Vigna unguiculata (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Vunguiculata_Vigun09g008100.1 Vigun09g008100.1 |
High | No | 882 | OG0015561 | Get ORF Coding potential... Type: noncoding Potential: -0.710 Folding energies... MFEI: -21.349 AMFE: -0.572 GC content %: 37.302 | |
Vunguiculata_Vigun09g008100.2 Vigun09g008100.2 |
High | No | 605 | OG0015561 | Get ORF Coding potential... Type: noncoding Potential: -0.663 Folding energies... MFEI: -21.207 AMFE: -0.535 GC content %: 39.669 | |
Vunguiculata_Vigun09g008100.3 Vigun09g008100.3 |
High | No | 596 | OG0015561 | Get ORF Coding potential... Type: noncoding Potential: -0.492 Folding energies... MFEI: -22.970 AMFE: -0.588 GC content %: 39.094 | |
Vunguiculata_Vigun09g008100.4 Vigun09g008100.4 |
High | No | 678 | OG0015561 | Get ORF Coding potential... Type: noncoding Potential: -0.499 Folding energies... MFEI: -22.920 AMFE: -0.600 GC content %: 38.201 |