Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Zmays5_Zm00001eb090270 Zm00001eb090270 |
2 | 122943409 | 122944793 | v5 | Zea mays (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Zmays5_Zm00001eb090270_T001 Zm00001eb090270_T001 |
Low | No | 355 | [1] | Get ORF Coding potential... Type: noncoding Potential: -0.147 Folding energies... MFEI: -31.718 AMFE: -0.609 GC content %: 52.113 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Zmays5_Zm00001eb090270_T001 | SwissProt | 2021-04-01 | Q6L482 | 4.76e-9 |
Zmays5_Zm00001eb090270_T001 | RepBase (RepeatMasker) | 0000-00-00 | RC/Helitron |