Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Zmays_Zm00001d002239 [ Zm00001d002239] |
2 | 8607518 | 8615365 | v4 | Zea mays (Phytozome 13) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Zmays_Zm00001d002239_T001 Zm00001d002239_T001 |
Low | No | 4261 | [1] | Get ORF Coding potential... Type: noncoding Potential: -1.129 Folding energies... MFEI: -27.726 AMFE: -0.632 GC content %: 43.839 | |
Zmays_Zm00001d002239_T009 Zm00001d002239_T009 |
Low | No | 3688 | [2] | Get ORF Coding potential... Type: noncoding Potential: -1.120 Folding energies... MFEI: -26.131 AMFE: -0.678 GC content %: 38.530 | |
Zmays_Zm00001d002239_T010 Zm00001d002239_T010 |
Low | No | 3899 | [3] | Get ORF Coding potential... Type: noncoding Potential: -0.870 Folding energies... MFEI: -27.915 AMFE: -0.647 GC content %: 43.139 | |
Zmays_Zm00001d002239_T011 Zm00001d002239_T011 |
Low | No | 5903 | [4] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.273 AMFE: -0.637 GC content %: 42.792 | |
Zmays_Zm00001d002239_T012 Zm00001d002239_T012 |
Low | No | 5459 | [5] | Get ORF Coding potential... Type: noncoding Potential: -1.057 Folding energies... MFEI: -27.478 AMFE: -0.627 GC content %: 43.836 | |
Zmays_Zm00001d002239_T013 Zm00001d002239_T013 |
Low | No | 4718 | [6] | Get ORF Coding potential... Type: noncoding Potential: -1.052 Folding energies... MFEI: -26.098 AMFE: -0.652 GC content %: 40.038 | |
Zmays_Zm00001d002239_T014 Zm00001d002239_T014 |
Low | No | 6016 | [7] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.242 AMFE: -0.631 GC content %: 43.168 | |
Zmays_Zm00001d002239_T016 Zm00001d002239_T016 |
Low | No | 3219 | [8] | Get ORF Coding potential... Type: noncoding Potential: -1.091 Folding energies... MFEI: -30.276 AMFE: -0.626 GC content %: 48.338 | |
Zmays_Zm00001d002239_T017 Zm00001d002239_T017 |
Low | No | 6056 | [9] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.081 AMFE: -0.631 GC content %: 42.883 | |
Zmays_Zm00001d002239_T018 Zm00001d002239_T018 |
Low | No | 6058 | [10] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.621 AMFE: -0.638 GC content %: 43.315 | |
Zmays_Zm00001d002239_T020 Zm00001d002239_T020 |
Low | No | 5502 | [11] | Get ORF Coding potential... Type: noncoding Potential: -1.057 Folding energies... MFEI: -25.556 AMFE: -0.647 GC content %: 39.477 | |
Zmays_Zm00001d002239_T022 Zm00001d002239_T022 |
Low | No | 4161 | [12] | Get ORF Coding potential... Type: noncoding Potential: -1.063 Folding energies... MFEI: -29.344 AMFE: -0.630 GC content %: 46.551 | |
Zmays_Zm00001d002239_T023 Zm00001d002239_T023 |
Low | No | 4931 | [13] | Get ORF Coding potential... Type: noncoding Potential: -1.053 Folding energies... MFEI: -25.972 AMFE: -0.645 GC content %: 40.276 | |
Zmays_Zm00001d002239_T024 Zm00001d002239_T024 |
Low | No | 4755 | [14] | Get ORF Coding potential... Type: noncoding Potential: -1.052 Folding energies... MFEI: -26.042 AMFE: -0.647 GC content %: 40.252 | |
Zmays_Zm00001d002239_T025 Zm00001d002239_T025 |
Low | No | 6246 | [15] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -27.291 AMFE: -0.632 GC content %: 43.164 | |
Zmays_Zm00001d002239_T026 Zm00001d002239_T026 |
Low | No | 5887 | [16] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.486 AMFE: -0.633 GC content %: 43.435 | |
Zmays_Zm00001d002239_T028 Zm00001d002239_T028 |
Low | No | 5971 | [17] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.243 AMFE: -0.638 GC content %: 42.690 | |
Zmays_Zm00001d002239_T029 Zm00001d002239_T029 |
Low | No | 3900 | [18] | Get ORF Coding potential... Type: noncoding Potential: -1.099 Folding energies... MFEI: -29.087 AMFE: -0.634 GC content %: 45.897 | |
Zmays_Zm00001d002239_T030 Zm00001d002239_T030 |
Low | No | 4036 | [19] | Get ORF Coding potential... Type: noncoding Potential: -1.062 Folding energies... MFEI: -29.081 AMFE: -0.628 GC content %: 46.308 | |
Zmays_Zm00001d002239_T032 Zm00001d002239_T032 |
Low | No | 5926 | [20] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.420 AMFE: -0.634 GC content %: 43.267 | |
Zmays_Zm00001d002239_T033 Zm00001d002239_T033 |
Low | No | 6239 | [21] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -27.419 AMFE: -0.640 GC content %: 42.875 | |
Zmays_Zm00001d002239_T035 Zm00001d002239_T035 |
Low | No | 5914 | [22] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.220 AMFE: -0.631 GC content %: 43.118 | |
Zmays_Zm00001d002239_T036 Zm00001d002239_T036 |
Low | No | 6138 | [23] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -27.462 AMFE: -0.630 GC content %: 43.565 | |
Zmays_Zm00001d002239_T037 Zm00001d002239_T037 |
Low | No | 6140 | [24] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -26.951 AMFE: -0.641 GC content %: 42.020 | |
Zmays_Zm00001d002239_T039 Zm00001d002239_T039 |
Low | No | 3859 | [25] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -29.295 AMFE: -0.634 GC content %: 46.204 | |
Zmays_Zm00001d002239_T040 Zm00001d002239_T040 |
Low | No | 5913 | [26] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.225 AMFE: -0.635 GC content %: 42.889 | |
Zmays_Zm00001d002239_T041 Zm00001d002239_T041 |
Low | No | 5774 | [27] | Get ORF Coding potential... Type: noncoding Potential: -1.017 Folding energies... MFEI: -27.418 AMFE: -0.634 GC content %: 43.228 | |
Zmays_Zm00001d002239_T042 Zm00001d002239_T042 |
Low | No | 5831 | [28] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.299 AMFE: -0.631 GC content %: 43.286 | |
Zmays_Zm00001d002239_T044 Zm00001d002239_T044 |
Low | No | 5045 | [29] | Get ORF Coding potential... Type: noncoding Potential: -1.054 Folding energies... MFEI: -25.659 AMFE: -0.639 GC content %: 40.178 | |
Zmays_Zm00001d002239_T045 Zm00001d002239_T045 |
Low | No | 5734 | [30] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -26.468 AMFE: -0.643 GC content %: 41.193 | |
Zmays_Zm00001d002239_T046 Zm00001d002239_T046 |
Low | No | 5855 | [31] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.510 AMFE: -0.634 GC content %: 43.382 | |
Zmays_Zm00001d002239_T047 Zm00001d002239_T047 |
Low | No | 3124 | [32] | Get ORF Coding potential... Type: noncoding Potential: -1.089 Folding energies... MFEI: -30.887 AMFE: -0.633 GC content %: 48.816 | |
Zmays_Zm00001d002239_T048 Zm00001d002239_T048 |
Low | No | 5715 | [33] | Get ORF Coding potential... Type: noncoding Potential: -1.058 Folding energies... MFEI: -25.185 AMFE: -0.650 GC content %: 38.758 | |
Zmays_Zm00001d002239_T051 Zm00001d002239_T051 |
Low | No | 4093 | [34] | Get ORF Coding potential... Type: noncoding Potential: -1.046 Folding energies... MFEI: -25.138 AMFE: -0.629 GC content %: 39.946 | |
Zmays_Zm00001d002239_T052 Zm00001d002239_T052 |
Low | No | 5219 | [35] | Get ORF Coding potential... Type: noncoding Potential: -1.055 Folding energies... MFEI: -25.601 AMFE: -0.641 GC content %: 39.950 | |
Zmays_Zm00001d002239_T053 Zm00001d002239_T053 |
Low | No | 5197 | [36] | Get ORF Coding potential... Type: noncoding Potential: -1.055 Folding energies... MFEI: -26.375 AMFE: -0.642 GC content %: 41.101 | |
Zmays_Zm00001d002239_T054 Zm00001d002239_T054 |
Low | No | 5838 | [37] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.191 AMFE: -0.636 GC content %: 42.737 | |
Zmays_Zm00001d002239_T055 Zm00001d002239_T055 |
Low | No | 5969 | [38] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.209 AMFE: -0.639 GC content %: 42.603 | |
Zmays_Zm00001d002239_T056 Zm00001d002239_T056 |
Low | No | 6366 | [39] | Get ORF Coding potential... Type: noncoding Potential: -1.062 Folding energies... MFEI: -27.226 AMFE: -0.635 GC content %: 42.884 | |
Zmays_Zm00001d002239_T058 Zm00001d002239_T058 |
Low | No | 6172 | [40] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -27.043 AMFE: -0.638 GC content %: 42.369 | |
Zmays_Zm00001d002239_T059 Zm00001d002239_T059 |
Low | No | 5892 | [41] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.242 AMFE: -0.630 GC content %: 43.228 | |
Zmays_Zm00001d002239_T060 Zm00001d002239_T060 |
Low | No | 6434 | [42] | Get ORF Coding potential... Type: noncoding Potential: -1.062 Folding energies... MFEI: -27.418 AMFE: -0.634 GC content %: 43.270 | |
Zmays_Zm00001d002239_T061 Zm00001d002239_T061 |
Low | No | 3510 | [43] | Get ORF Coding potential... Type: noncoding Potential: -0.940 Folding energies... MFEI: -28.584 AMFE: -0.642 GC content %: 44.530 | |
Zmays_Zm00001d002239_T062 Zm00001d002239_T062 |
Low | No | 4864 | [44] | Get ORF Coding potential... Type: noncoding Potential: -1.053 Folding energies... MFEI: -27.202 AMFE: -0.653 GC content %: 41.632 | |
Zmays_Zm00001d002239_T066 Zm00001d002239_T066 |
Low | No | 5271 | [45] | Get ORF Coding potential... Type: noncoding Potential: -1.056 Folding energies... MFEI: -25.581 AMFE: -0.642 GC content %: 39.822 | |
Zmays_Zm00001d002239_T067 Zm00001d002239_T067 |
Low | No | 4499 | [46] | Get ORF Coding potential... Type: noncoding Potential: -1.050 Folding energies... MFEI: -26.259 AMFE: -0.652 GC content %: 40.276 | |
Zmays_Zm00001d002239_T070 Zm00001d002239_T070 |
Low | No | 2956 | [47] | Get ORF Coding potential... Type: noncoding Potential: -1.046 Folding energies... MFEI: -30.673 AMFE: -0.648 GC content %: 47.327 | |
Zmays_Zm00001d002239_T071 Zm00001d002239_T071 |
Low | No | 3067 | [48] | Get ORF Coding potential... Type: noncoding Potential: -0.930 Folding energies... MFEI: -30.877 AMFE: -0.637 GC content %: 48.451 | |
Zmays_Zm00001d002239_T072 Zm00001d002239_T072 |
Low | No | 5554 | [49] | Get ORF Coding potential... Type: noncoding Potential: -1.057 Folding energies... MFEI: -27.324 AMFE: -0.627 GC content %: 43.572 | |
Zmays_Zm00001d002239_T073 Zm00001d002239_T073 |
Low | No | 3099 | [50] | Get ORF Coding potential... Type: noncoding Potential: -1.075 Folding energies... MFEI: -30.720 AMFE: -0.633 GC content %: 48.564 | |
Zmays_Zm00001d002239_T074 Zm00001d002239_T074 |
Low | No | 4587 | [51] | Get ORF Coding potential... Type: noncoding Potential: -1.131 Folding energies... MFEI: -28.147 AMFE: -0.632 GC content %: 44.561 | |
Zmays_Zm00001d002239_T075 Zm00001d002239_T075 |
Low | No | 3037 | [52] | Get ORF Coding potential... Type: noncoding Potential: -1.088 Folding energies... MFEI: -31.057 AMFE: -0.634 GC content %: 48.963 | |
Zmays_Zm00001d002239_T077 Zm00001d002239_T077 |
Low | No | 4160 | [53] | Get ORF Coding potential... Type: noncoding Potential: -1.046 Folding energies... MFEI: -25.228 AMFE: -0.633 GC content %: 39.880 | |
Zmays_Zm00001d002239_T079 Zm00001d002239_T079 |
Low | No | 4933 | [54] | Get ORF Coding potential... Type: noncoding Potential: -1.000 Folding energies... MFEI: -25.621 AMFE: -0.638 GC content %: 40.158 | |
Zmays_Zm00001d002239_T080 Zm00001d002239_T080 |
Low | No | 3482 | [55] | Get ORF Coding potential... Type: noncoding Potential: -1.086 Folding energies... MFEI: -26.505 AMFE: -0.641 GC content %: 41.327 | |
Zmays_Zm00001d002239_T082 Zm00001d002239_T082 |
Low | No | 5996 | [56] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.120 AMFE: -0.639 GC content %: 42.428 | |
Zmays_Zm00001d002239_T083 Zm00001d002239_T083 |
Low | No | 6146 | [57] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -27.062 AMFE: -0.639 GC content %: 42.320 | |
Zmays_Zm00001d002239_T084 Zm00001d002239_T084 |
Low | No | 3088 | [58] | Get ORF Coding potential... Type: noncoding Potential: -0.931 Folding energies... MFEI: -30.687 AMFE: -0.641 GC content %: 47.895 | |
Zmays_Zm00001d002239_T085 Zm00001d002239_T085 |
Low | No | 5938 | [59] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.221 AMFE: -0.635 GC content %: 42.860 | |
Zmays_Zm00001d002239_T086 Zm00001d002239_T086 |
Low | No | 6516 | [60] | Get ORF Coding potential... Type: noncoding Potential: -1.062 Folding energies... MFEI: -27.159 AMFE: -0.634 GC content %: 42.818 | |
Zmays_Zm00001d002239_T087 Zm00001d002239_T087 |
Low | No | 4437 | [61] | Get ORF Coding potential... Type: noncoding Potential: -1.066 Folding energies... MFEI: -29.031 AMFE: -0.630 GC content %: 46.067 | |
Zmays_Zm00001d002239_T088 Zm00001d002239_T088 |
Low | No | 6187 | [62] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -27.424 AMFE: -0.631 GC content %: 43.478 | |
Zmays_Zm00001d002239_T089 Zm00001d002239_T089 |
Low | No | 5703 | [63] | Get ORF Coding potential... Type: noncoding Potential: -1.220 Folding energies... MFEI: -28.061 AMFE: -0.634 GC content %: 44.275 | |
Zmays_Zm00001d002239_T090 Zm00001d002239_T090 |
Low | No | 3091 | [64] | Get ORF Coding potential... Type: noncoding Potential: -1.089 Folding energies... MFEI: -30.941 AMFE: -0.633 GC content %: 48.852 | |
Zmays_Zm00001d002239_T096 Zm00001d002239_T096 |
Low | No | 5377 | [65] | Get ORF Coding potential... Type: noncoding Potential: -1.056 Folding energies... MFEI: -27.398 AMFE: -0.640 GC content %: 42.831 | |
Zmays_Zm00001d002239_T098 Zm00001d002239_T098 |
Low | No | 5784 | [66] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.260 AMFE: -0.640 GC content %: 42.566 | |
Zmays_Zm00001d002239_T099 Zm00001d002239_T099 |
Low | No | 5004 | [67] | Get ORF Coding potential... Type: noncoding Potential: -1.054 Folding energies... MFEI: -27.906 AMFE: -0.644 GC content %: 43.325 | |
Zmays_Zm00001d002239_T100 Zm00001d002239_T100 |
Low | No | 5607 | [68] | Get ORF Coding potential... Type: noncoding Potential: -1.058 Folding energies... MFEI: -27.296 AMFE: -0.636 GC content %: 42.946 | |
Zmays_Zm00001d002239_T101 Zm00001d002239_T101 |
Low | No | 5790 | [69] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.380 AMFE: -0.638 GC content %: 42.919 | |
Zmays_Zm00001d002239_T102 Zm00001d002239_T102 |
Low | No | 3008 | [70] | Get ORF Coding potential... Type: noncoding Potential: -1.047 Folding energies... MFEI: -30.928 AMFE: -0.639 GC content %: 48.404 | |
Zmays_Zm00001d002239_T103 Zm00001d002239_T103 |
Low | No | 5327 | [71] | Get ORF Coding potential... Type: noncoding Potential: -1.056 Folding energies... MFEI: -27.612 AMFE: -0.639 GC content %: 43.233 | |
Zmays_Zm00001d002239_T104 Zm00001d002239_T104 |
Low | No | 4848 | [72] | Get ORF Coding potential... Type: noncoding Potential: -1.053 Folding energies... MFEI: -27.279 AMFE: -0.643 GC content %: 42.430 | |
Zmays_Zm00001d002239_T105 Zm00001d002239_T105 |
Low | No | 5937 | [73] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.187 AMFE: -0.630 GC content %: 43.187 | |
Zmays_Zm00001d002239_T106 Zm00001d002239_T106 |
High | No | 870 | [74] | Get ORF Coding potential... Type: noncoding Potential: -0.993 Folding energies... MFEI: -28.897 AMFE: -0.632 GC content %: 45.747 | |
Zmays_Zm00001d002239_T107 Zm00001d002239_T107 |
Low | No | 5803 | [75] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.126 AMFE: -0.632 GC content %: 42.892 | |
Zmays_Zm00001d002239_T109 Zm00001d002239_T109 |
Low | No | 6542 | [76] | Get ORF Coding potential... Type: noncoding Potential: -1.063 Folding energies... MFEI: -27.348 AMFE: -0.636 GC content %: 43.030 | |
Zmays_Zm00001d002239_T111 Zm00001d002239_T111 |
Low | No | 6297 | [77] | Get ORF Coding potential... Type: noncoding Potential: -0.952 Folding energies... MFEI: -27.159 AMFE: -0.641 GC content %: 42.338 | |
Zmays_Zm00001d002239_T112 Zm00001d002239_T112 |
Low | No | 5764 | [78] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.292 AMFE: -0.639 GC content %: 42.696 | |
Zmays_Zm00001d002239_T113 Zm00001d002239_T113 |
Low | No | 5858 | [79] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.453 AMFE: -0.634 GC content %: 43.291 | |
Zmays_Zm00001d002239_T117 Zm00001d002239_T117 |
Low | No | 5094 | [80] | Get ORF Coding potential... Type: noncoding Potential: -1.055 Folding energies... MFEI: -27.831 AMFE: -0.639 GC content %: 43.581 | |
Zmays_Zm00001d002239_T118 Zm00001d002239_T118 |
Low | No | 6626 | [81] | Get ORF Coding potential... Type: noncoding Potential: -1.063 Folding energies... MFEI: -27.170 AMFE: -0.639 GC content %: 42.529 | |
Zmays_Zm00001d002239_T119 Zm00001d002239_T119 |
Low | No | 5676 | [82] | Get ORF Coding potential... Type: noncoding Potential: -1.058 Folding energies... MFEI: -27.311 AMFE: -0.634 GC content %: 43.094 | |
Zmays_Zm00001d002239_T120 Zm00001d002239_T120 |
Low | No | 3006 | [83] | Get ORF Coding potential... Type: noncoding Potential: -1.072 Folding energies... MFEI: -31.055 AMFE: -0.635 GC content %: 48.935 | |
Zmays_Zm00001d002239_T121 Zm00001d002239_T121 |
Low | No | 5374 | [84] | Get ORF Coding potential... Type: noncoding Potential: -1.056 Folding energies... MFEI: -26.072 AMFE: -0.647 GC content %: 40.268 | |
Zmays_Zm00001d002239_T122 Zm00001d002239_T122 |
Low | No | 6916 | [85] | Get ORF Coding potential... Type: noncoding Potential: -1.064 Folding energies... MFEI: -27.005 AMFE: -0.648 GC content %: 41.657 | |
Zmays_Zm00001d002239_T123 Zm00001d002239_T123 |
Low | No | 5861 | [86] | Get ORF Coding potential... Type: noncoding Potential: -1.137 Folding energies... MFEI: -27.482 AMFE: -0.638 GC content %: 43.098 | |
Zmays_Zm00001d002239_T124 Zm00001d002239_T124 |
Low | No | 6008 | [87] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.562 AMFE: -0.637 GC content %: 43.276 | |
Zmays_Zm00001d002239_T125 Zm00001d002239_T125 |
Low | No | 3995 | [88] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -30.070 AMFE: -0.634 GC content %: 47.434 | |
Zmays_Zm00001d002239_T127 Zm00001d002239_T127 |
Low | No | 5824 | [89] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -26.933 AMFE: -0.645 GC content %: 41.758 | |
Zmays_Zm00001d002239_T129 Zm00001d002239_T129 |
Low | No | 5830 | [90] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.328 AMFE: -0.636 GC content %: 42.950 | |
Zmays_Zm00001d002239_T131 Zm00001d002239_T131 |
Low | No | 5297 | [91] | Get ORF Coding potential... Type: noncoding Potential: -1.056 Folding energies... MFEI: -25.860 AMFE: -0.644 GC content %: 40.136 | |
Zmays_Zm00001d002239_T132 Zm00001d002239_T132 |
Low | No | 5792 | [92] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -26.445 AMFE: -0.639 GC content %: 41.385 | |
Zmays_Zm00001d002239_T133 Zm00001d002239_T133 |
Low | No | 6051 | [93] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.587 AMFE: -0.633 GC content %: 43.563 | |
Zmays_Zm00001d002239_T135 Zm00001d002239_T135 |
Low | No | 5439 | [94] | Get ORF Coding potential... Type: noncoding Potential: -1.057 Folding energies... MFEI: -26.531 AMFE: -0.640 GC content %: 41.441 | |
Zmays_Zm00001d002239_T136 Zm00001d002239_T136 |
Low | No | 5926 | [95] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.369 AMFE: -0.638 GC content %: 42.913 | |
Zmays_Zm00001d002239_T138 Zm00001d002239_T138 |
Low | No | 6308 | [96] | Get ORF Coding potential... Type: noncoding Potential: -1.062 Folding energies... MFEI: -27.506 AMFE: -0.634 GC content %: 43.358 | |
Zmays_Zm00001d002239_T140 Zm00001d002239_T140 |
Low | No | 5788 | [97] | Get ORF Coding potential... Type: noncoding Potential: -1.006 Folding energies... MFEI: -26.593 AMFE: -0.646 GC content %: 41.154 | |
Zmays_Zm00001d002239_T141 Zm00001d002239_T141 |
Low | No | 5737 | [98] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -26.917 AMFE: -0.632 GC content %: 42.618 | |
Zmays_Zm00001d002239_T143 Zm00001d002239_T143 |
Low | No | 6209 | [99] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -27.198 AMFE: -0.629 GC content %: 43.244 | |
Zmays_Zm00001d002239_T144 Zm00001d002239_T144 |
High | No | 876 | [100] | Get ORF Coding potential... Type: noncoding Potential: -1.187 Folding energies... MFEI: -29.600 AMFE: -0.650 GC content %: 45.548 | |
Zmays_Zm00001d002239_T145 Zm00001d002239_T145 |
Low | No | 5815 | [101] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -26.917 AMFE: -0.627 GC content %: 42.906 | |
Zmays_Zm00001d002239_T147 Zm00001d002239_T147 |
Low | No | 2160 | [102] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.384 AMFE: -0.640 GC content %: 42.778 | |
Zmays_Zm00001d002239_T148 Zm00001d002239_T148 |
Low | No | 3649 | [103] | Get ORF Coding potential... Type: noncoding Potential: -1.096 Folding energies... MFEI: -29.235 AMFE: -0.632 GC content %: 46.259 | |
Zmays_Zm00001d002239_T149 Zm00001d002239_T149 |
Low | No | 3900 | [104] | Get ORF Coding potential... Type: noncoding Potential: -1.099 Folding energies... MFEI: -29.633 AMFE: -0.628 GC content %: 47.154 | |
Zmays_Zm00001d002239_T150 Zm00001d002239_T150 |
Low | No | 6134 | [105] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -27.315 AMFE: -0.629 GC content %: 43.446 | |
Zmays_Zm00001d002239_T152 Zm00001d002239_T152 |
Low | No | 3577 | [106] | Get ORF Coding potential... Type: noncoding Potential: -1.103 Folding energies... MFEI: -29.416 AMFE: -0.623 GC content %: 47.190 | |
Zmays_Zm00001d002239_T154 Zm00001d002239_T154 |
Low | No | 5585 | [107] | Get ORF Coding potential... Type: noncoding Potential: -1.058 Folding energies... MFEI: -26.591 AMFE: -0.644 GC content %: 41.289 | |
Zmays_Zm00001d002239_T155 Zm00001d002239_T155 |
Low | No | 6239 | [108] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -26.721 AMFE: -0.639 GC content %: 41.802 | |
Zmays_Zm00001d002239_T156 Zm00001d002239_T156 |
Low | No | 6312 | [109] | Get ORF Coding potential... Type: noncoding Potential: -1.062 Folding energies... MFEI: -26.999 AMFE: -0.636 GC content %: 42.459 | |
Zmays_Zm00001d002239_T157 Zm00001d002239_T157 |
Low | No | 2352 | [110] | Get ORF Coding potential... Type: noncoding Potential: -1.030 Folding energies... MFEI: -28.780 AMFE: -0.663 GC content %: 43.410 | |
Zmays_Zm00001d002239_T158 Zm00001d002239_T158 |
Low | No | 5904 | [111] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -26.529 AMFE: -0.645 GC content %: 41.108 | |
Zmays_Zm00001d002239_T159 Zm00001d002239_T159 |
Low | No | 6332 | [112] | Get ORF Coding potential... Type: noncoding Potential: -1.062 Folding energies... MFEI: -26.701 AMFE: -0.638 GC content %: 41.867 | |
Zmays_Zm00001d002239_T161 Zm00001d002239_T161 |
Low | No | 5062 | [113] | Get ORF Coding potential... Type: noncoding Potential: -1.054 Folding energies... MFEI: -25.435 AMFE: -0.641 GC content %: 39.708 | |
Zmays_Zm00001d002239_T163 Zm00001d002239_T163 |
Low | No | 6018 | [114] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -26.967 AMFE: -0.628 GC content %: 42.921 | |
Zmays_Zm00001d002239_T167 Zm00001d002239_T167 |
Low | No | 3924 | [115] | Get ORF Coding potential... Type: noncoding Potential: -1.044 Folding energies... MFEI: -25.031 AMFE: -0.630 GC content %: 39.730 | |
Zmays_Zm00001d002239_T168 Zm00001d002239_T168 |
Low | No | 6125 | [116] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -25.050 AMFE: -0.645 GC content %: 38.857 | |
Zmays_Zm00001d002239_T169 Zm00001d002239_T169 |
Low | No | 4415 | [117] | Get ORF Coding potential... Type: noncoding Potential: -1.049 Folding energies... MFEI: -26.272 AMFE: -0.653 GC content %: 40.249 | |
Zmays_Zm00001d002239_T170 Zm00001d002239_T170 |
Low | No | 5641 | [118] | Get ORF Coding potential... Type: noncoding Potential: -1.058 Folding energies... MFEI: -26.761 AMFE: -0.642 GC content %: 41.659 | |
Zmays_Zm00001d002239_T171 Zm00001d002239_T171 |
Low | No | 2696 | [119] | Get ORF Coding potential... Type: noncoding Potential: -1.040 Folding energies... MFEI: -30.256 AMFE: -0.652 GC content %: 46.402 | |
Zmays_Zm00001d002239_T172 Zm00001d002239_T172 |
Low | No | 6150 | [120] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -27.072 AMFE: -0.632 GC content %: 42.862 | |
Zmays_Zm00001d002239_T173 Zm00001d002239_T173 |
Low | No | 2900 | [121] | Get ORF Coding potential... Type: noncoding Potential: -1.027 Folding energies... MFEI: -30.617 AMFE: -0.635 GC content %: 48.207 | |
Zmays_Zm00001d002239_T174 Zm00001d002239_T174 |
Low | No | 5815 | [122] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.157 AMFE: -0.627 GC content %: 43.319 | |
Zmays_Zm00001d002239_T176 Zm00001d002239_T176 |
Low | No | 2754 | [123] | Get ORF Coding potential... Type: noncoding Potential: -1.153 Folding energies... MFEI: -25.345 AMFE: -0.633 GC content %: 40.051 | |
Zmays_Zm00001d002239_T177 Zm00001d002239_T177 |
Low | No | 3602 | [124] | Get ORF Coding potential... Type: noncoding Potential: -1.040 Folding energies... MFEI: -25.600 AMFE: -0.648 GC content %: 39.506 | |
Zmays_Zm00001d002239_T178 Zm00001d002239_T178 |
Low | No | 5177 | [125] | Get ORF Coding potential... Type: noncoding Potential: -1.055 Folding energies... MFEI: -25.737 AMFE: -0.645 GC content %: 39.927 | |
Zmays_Zm00001d002239_T179 Zm00001d002239_T179 |
Low | No | 6145 | [126] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -26.986 AMFE: -0.629 GC content %: 42.897 | |
Zmays_Zm00001d002239_T180 Zm00001d002239_T180 |
Low | No | 6085 | [127] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -27.190 AMFE: -0.628 GC content %: 43.320 | |
Zmays_Zm00001d002239_T182 Zm00001d002239_T182 |
Low | No | 4796 | [128] | Get ORF Coding potential... Type: noncoding Potential: -1.052 Folding energies... MFEI: -27.389 AMFE: -0.631 GC content %: 43.411 | |
Zmays_Zm00001d002239_T184 Zm00001d002239_T184 |
Low | No | 3826 | [129] | Get ORF Coding potential... Type: noncoding Potential: -1.042 Folding energies... MFEI: -25.520 AMFE: -0.649 GC content %: 39.310 | |
Zmays_Zm00001d002239_T185 Zm00001d002239_T185 |
Low | No | 1861 | [130] | Get ORF Coding potential... Type: noncoding Potential: -1.011 Folding energies... MFEI: -28.404 AMFE: -0.644 GC content %: 44.116 | |
Zmays_Zm00001d002239_T186 Zm00001d002239_T186 |
Low | No | 5704 | [131] | Get ORF Coding potential... Type: noncoding Potential: -1.058 Folding energies... MFEI: -26.815 AMFE: -0.639 GC content %: 41.971 | |
Zmays_Zm00001d002239_T187 Zm00001d002239_T187 |
Low | No | 5811 | [132] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.047 AMFE: -0.620 GC content %: 43.590 | |
Zmays_Zm00001d002239_T189 Zm00001d002239_T189 |
Low | No | 5817 | [133] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.062 AMFE: -0.629 GC content %: 43.012 | |
Zmays_Zm00001d002239_T190 Zm00001d002239_T190 |
Low | No | 5855 | [134] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.021 AMFE: -0.627 GC content %: 43.108 | |
Zmays_Zm00001d002239_T191 Zm00001d002239_T191 |
Low | No | 5386 | [135] | Get ORF Coding potential... Type: noncoding Potential: -1.056 Folding energies... MFEI: -27.205 AMFE: -0.633 GC content %: 42.945 | |
Zmays_Zm00001d002239_T192 Zm00001d002239_T192 |
Low | No | 2801 | [136] | Get ORF Coding potential... Type: noncoding Potential: -1.064 Folding energies... MFEI: -30.278 AMFE: -0.632 GC content %: 47.876 | |
Zmays_Zm00001d002239_T194 Zm00001d002239_T194 |
Low | No | 5289 | [137] | Get ORF Coding potential... Type: noncoding Potential: -1.217 Folding energies... MFEI: -25.850 AMFE: -0.642 GC content %: 40.291 | |
Zmays_Zm00001d002239_T195 Zm00001d002239_T195 |
Low | No | 4887 | [138] | Get ORF Coding potential... Type: noncoding Potential: -1.053 Folding energies... MFEI: -27.635 AMFE: -0.634 GC content %: 43.585 | |
Zmays_Zm00001d002239_T196 Zm00001d002239_T196 |
Low | No | 5494 | [139] | Get ORF Coding potential... Type: noncoding Potential: -1.057 Folding energies... MFEI: -27.372 AMFE: -0.631 GC content %: 43.393 | |
Zmays_Zm00001d002239_T197 Zm00001d002239_T197 |
Low | No | 5140 | [140] | Get ORF Coding potential... Type: noncoding Potential: -1.055 Folding energies... MFEI: -25.589 AMFE: -0.643 GC content %: 39.825 | |
Zmays_Zm00001d002239_T198 Zm00001d002239_T198 |
Low | No | 5672 | [141] | Get ORF Coding potential... Type: noncoding Potential: -1.058 Folding energies... MFEI: -27.530 AMFE: -0.628 GC content %: 43.847 | |
Zmays_Zm00001d002239_T199 Zm00001d002239_T199 |
Low | No | 1835 | [142] | Get ORF Coding potential... Type: noncoding Potential: -1.010 Folding energies... MFEI: -28.376 AMFE: -0.641 GC content %: 44.251 | |
Zmays_Zm00001d002239_T200 Zm00001d002239_T200 |
Low | No | 5956 | [143] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -25.447 AMFE: -0.649 GC content %: 39.204 | |
Zmays_Zm00001d002239_T201 Zm00001d002239_T201 |
Low | No | 5647 | [144] | Get ORF Coding potential... Type: noncoding Potential: -1.016 Folding energies... MFEI: -26.632 AMFE: -0.642 GC content %: 41.509 | |
Zmays_Zm00001d002239_T202 Zm00001d002239_T202 |
Low | No | 5694 | [145] | Get ORF Coding potential... Type: noncoding Potential: -1.058 Folding energies... MFEI: -27.331 AMFE: -0.630 GC content %: 43.379 | |
Zmays_Zm00001d002239_T203 Zm00001d002239_T203 |
Low | No | 5877 | [146] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -25.658 AMFE: -0.647 GC content %: 39.646 | |
Zmays_Zm00001d002239_T204 Zm00001d002239_T204 |
Low | No | 5074 | [147] | Get ORF Coding potential... Type: noncoding Potential: -1.054 Folding energies... MFEI: -27.377 AMFE: -0.635 GC content %: 43.142 | |
Zmays_Zm00001d002239_T205 Zm00001d002239_T205 |
Low | No | 5579 | [148] | Get ORF Coding potential... Type: noncoding Potential: -1.058 Folding energies... MFEI: -26.960 AMFE: -0.630 GC content %: 42.821 | |
Zmays_Zm00001d002239_T206 Zm00001d002239_T206 |
Low | No | 5387 | [149] | Get ORF Coding potential... Type: noncoding Potential: -1.035 Folding energies... MFEI: -26.996 AMFE: -0.632 GC content %: 42.695 | |
Zmays_Zm00001d002239_T207 Zm00001d002239_T207 |
Low | No | 4819 | [150] | Get ORF Coding potential... Type: noncoding Potential: -1.052 Folding energies... MFEI: -25.240 AMFE: -0.637 GC content %: 39.593 | |
Zmays_Zm00001d002239_T208 Zm00001d002239_T208 |
Low | No | 2482 | [151] | Get ORF Coding potential... Type: noncoding Potential: -1.034 Folding energies... MFEI: -28.832 AMFE: -0.653 GC content %: 44.158 | |
Zmays_Zm00001d002239_T209 Zm00001d002239_T209 |
Low | No | 5408 | [152] | Get ORF Coding potential... Type: noncoding Potential: -1.057 Folding energies... MFEI: -26.241 AMFE: -0.648 GC content %: 40.514 | |
Zmays_Zm00001d002239_T211 Zm00001d002239_T211 |
Low | No | 2811 | [153] | Get ORF Coding potential... Type: noncoding Potential: -1.043 Folding energies... MFEI: -30.765 AMFE: -0.632 GC content %: 48.702 | |
Zmays_Zm00001d002239_T212 Zm00001d002239_T212 |
Low | No | 5537 | [154] | Get ORF Coding potential... Type: noncoding Potential: -0.930 Folding energies... MFEI: -27.405 AMFE: -0.635 GC content %: 43.164 | |
Zmays_Zm00001d002239_T213 Zm00001d002239_T213 |
Low | No | 4324 | [155] | Get ORF Coding potential... Type: noncoding Potential: -1.125 Folding energies... MFEI: -25.136 AMFE: -0.656 GC content %: 38.321 | |
Zmays_Zm00001d002239_T214 Zm00001d002239_T214 |
Low | No | 4566 | [156] | Get ORF Coding potential... Type: noncoding Potential: -1.050 Folding energies... MFEI: -24.985 AMFE: -0.635 GC content %: 39.356 | |
Zmays_Zm00001d002239_T215 Zm00001d002239_T215 |
Low | No | 5651 | [157] | Get ORF Coding potential... Type: noncoding Potential: -1.220 Folding energies... MFEI: -26.786 AMFE: -0.639 GC content %: 41.904 | |
Zmays_Zm00001d002239_T216 Zm00001d002239_T216 |
Low | No | 4690 | [158] | Get ORF Coding potential... Type: noncoding Potential: -1.051 Folding energies... MFEI: -27.618 AMFE: -0.640 GC content %: 43.134 | |
Zmays_Zm00001d002239_T217 Zm00001d002239_T217 |
Low | No | 6699 | [159] | Get ORF Coding potential... Type: noncoding Potential: -1.063 Folding energies... MFEI: -26.741 AMFE: -0.635 GC content %: 42.096 | |
Zmays_Zm00001d002239_T218 Zm00001d002239_T218 |
Low | No | 5445 | [160] | Get ORF Coding potential... Type: noncoding Potential: -1.057 Folding energies... MFEI: -27.513 AMFE: -0.628 GC content %: 43.783 | |
Zmays_Zm00001d002239_T219 Zm00001d002239_T219 |
Low | No | 5772 | [161] | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -27.176 AMFE: -0.628 GC content %: 43.261 | |
Zmays_Zm00001d002239_T220 Zm00001d002239_T220 |
Low | No | 4850 | [162] | Get ORF Coding potential... Type: noncoding Potential: -1.053 Folding energies... MFEI: -27.788 AMFE: -0.633 GC content %: 43.897 | |
Zmays_Zm00001d002239_T222 Zm00001d002239_T222 |
Low | No | 3449 | [163] | Get ORF Coding potential... Type: noncoding Potential: -1.037 Folding energies... MFEI: -25.045 AMFE: -0.624 GC content %: 40.128 | |
Zmays_Zm00001d002239_T223 Zm00001d002239_T223 |
Low | No | 6621 | [164] | Get ORF Coding potential... Type: noncoding Potential: -1.063 Folding energies... MFEI: -25.498 AMFE: -0.655 GC content %: 38.922 | |
Zmays_Zm00001d002239_T224 Zm00001d002239_T224 |
Low | No | 5974 | [165] | Get ORF Coding potential... Type: noncoding Potential: -1.060 Folding energies... MFEI: -25.578 AMFE: -0.648 GC content %: 39.488 | |
Zmays_Zm00001d002239_T225 Zm00001d002239_T225 |
Low | No | 5290 | [166] | Get ORF Coding potential... Type: noncoding Potential: -1.056 Folding energies... MFEI: -26.008 AMFE: -0.642 GC content %: 40.510 | |
Zmays_Zm00001d002239_T226 Zm00001d002239_T226 |
Low | No | 5460 | [167] | Get ORF Coding potential... Type: noncoding Potential: -1.057 Folding energies... MFEI: -27.324 AMFE: -0.626 GC content %: 43.626 | |
Zmays_Zm00001d002239_T227 Zm00001d002239_T227 |
Low | No | 6230 | [168] | Get ORF Coding potential... Type: noncoding Potential: -1.061 Folding energies... MFEI: -26.469 AMFE: -0.633 GC content %: 41.830 | |
Zmays_Zm00001d002239_T228 Zm00001d002239_T228 |
Low | No | 4257 | [169] | Get ORF Coding potential... Type: noncoding Potential: -1.086 Folding energies... MFEI: -26.453 AMFE: -0.651 GC content %: 40.639 | |
Zmays_Zm00001d002239_T229 Zm00001d002239_T229 |
Low | No | 4797 | [170] | Get ORF Coding potential... Type: noncoding Potential: -0.985 Folding energies... MFEI: -27.542 AMFE: -0.638 GC content %: 43.152 | |
Zmays_Zm00001d002239_T230 Zm00001d002239_T230 |
Low | No | 6423 | [171] | Get ORF Coding potential... Type: noncoding Potential: -1.062 Folding energies... MFEI: -25.421 AMFE: -0.652 GC content %: 38.985 | |
Zmays_Zm00001d002239_T231 Zm00001d002239_T231 |
Low | No | 4993 | [172] | Get ORF Coding potential... Type: noncoding Potential: -1.054 Folding energies... MFEI: -25.239 AMFE: -0.637 GC content %: 39.615 | |
Zmays_Zm00001d002239_T232 Zm00001d002239_T232 |
Low | No | 4828 | [173] | Get ORF Coding potential... Type: noncoding Potential: -1.052 Folding energies... MFEI: -25.449 AMFE: -0.628 GC content %: 40.514 | |
Zmays_Zm00001d002239_T233 Zm00001d002239_T233 |
Low | No | 4322 | [174] | Get ORF Coding potential... Type: noncoding Potential: -1.048 Folding energies... MFEI: -25.708 AMFE: -0.604 GC content %: 42.573 | |
Zmays_Zm00001d002239_T234 Zm00001d002239_T234 |
Low | No | 2865 | [175] | Get ORF Coding potential... Type: noncoding Potential: -1.026 Folding energies... MFEI: -27.253 AMFE: -0.619 GC content %: 44.049 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Zmays_Zm00001d002239_T201 | SwissProt | 2021-04-01 | Q9C5W7 | 2.97e-5 |
Zmays_Zm00001d002239_T075 | SwissProt | 2021-04-01 | Q9C5W7 | 1.13e-5 |
Zmays_Zm00001d002239_T224 | RepBase (RepeatMasker) | 0000-00-00 | RC/Helitron | |
Zmays_Zm00001d002239_T122 | RepBase (RepeatMasker) | 0000-00-00 | RC/Helitron | |
Zmays_Zm00001d002239_T011 | RepBase (RepeatMasker) | 0000-00-00 | RC/Helitron | |
Zmays_Zm00001d002239_T220 | SwissProt | 2021-04-01 | Q9C5W7 | 2.51e-5 |
Zmays_Zm00001d002239_T103 | SwissProt | 2021-04-01 | Q9C5W7 | 2.78e-5 |
Zmays_Zm00001d002239_T147 | RepBase (RepeatMasker) | 0000-00-00 | RC/Helitron | |
Zmays_Zm00001d002239_T032 | RepBase (RepeatMasker) | 0000-00-00 | RC/Helitron | |
Zmays_Zm00001d002239_T129 | SwissProt | 2021-04-01 | Q9C5W7 | 3.07e-5 |
... further results