Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Zmays_Zm00001d027971 [ Zm00001d027971] |
1 | 18761417 | 18771095 | v4 | Zea mays (Phytozome 13) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Zmays_Zm00001d027971_T004 Zm00001d027971_T004 |
Low | No | 648 | [1] | Get ORF Coding potential... Type: noncoding Potential: -1.456 Folding energies... MFEI: -27.346 AMFE: -0.687 GC content %: 39.815 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Zmays_Zm00001d027971_T004 | RepBase (RepeatMasker) | 0000-00-00 | LTR/Gypsy |