Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Zmays_Zm00001d043693 [ Zm00001d043693] |
3 | 207551760 | 207556797 | v4 | Zea mays (Phytozome 13) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Zmays_Zm00001d043693_T003 Zm00001d043693_T003 |
Low | No | 746 | [1] | Get ORF Coding potential... Type: noncoding Potential: -1.169 Folding energies... MFEI: -31.475 AMFE: -0.658 GC content %: 47.855 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Zmays_Zm00001d043693_T003 | SwissProt | 2021-04-01 | Q9CAI5 | 2.59e-7 |