Difference between revisions of "Main Page"
From GreeNC
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<includeonly><div class="resolution-warning">Warning. For a properly visualization of the information provided for this database, it is recommended a minimum width resolution of 768px.</div></includeonly> | <includeonly><div class="resolution-warning">Warning. For a properly visualization of the information provided for this database, it is recommended a minimum width resolution of 768px.</div></includeonly> | ||
<div id="main-plants" class="all-width"> | <div id="main-plants" class="all-width"> | ||
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{{Main Plant|Amborella trichopoda v1.0|Amborella trichopoda v1.0.jpg}} | {{Main Plant|Amborella trichopoda v1.0|Amborella trichopoda v1.0.jpg}} | ||
{{Main Plant|Aquilegia coerulea v1.1|Aquilegia coerulea v1.1.jpg}} | {{Main Plant|Aquilegia coerulea v1.1|Aquilegia coerulea v1.1.jpg}} | ||
{{Main Plant|Arabidopsis halleri v1.1|Arabidopsis halleri v1.1.jpg}} | {{Main Plant|Arabidopsis halleri v1.1|Arabidopsis halleri v1.1.jpg}} | ||
{{Main Plant|Arabidopsis lyrata v1.0|Arabidopsis lyrata v1.0.jpg}} | {{Main Plant|Arabidopsis lyrata v1.0|Arabidopsis lyrata v1.0.jpg}} | ||
| − | {{Main Plant|Arabidopsis thaliana TAIR10|Arabidopsis thaliana | + | {{Main Plant|Arabidopsis thaliana TAIR10|Arabidopsis thaliana.jpg}} |
{{Main Plant|Boechera stricta v1.2|Boechera stricta v1.2.jpg}} | {{Main Plant|Boechera stricta v1.2|Boechera stricta v1.2.jpg}} | ||
{{Main Plant|Brachypodium distachyon v2.1|Brachypodium distachyon v2.1.jpg}} | {{Main Plant|Brachypodium distachyon v2.1|Brachypodium distachyon v2.1.jpg}} | ||
| − | {{Main Plant|Brassica rapa FPsc v1.3|Brassica rapa | + | {{Main Plant|Brassica rapa FPsc v1.3|Brassica rapa.jpg}} |
{{Main Plant|Capsella grandiflora v1.1|Capsella grandiflora v1.1.jpg}} | {{Main Plant|Capsella grandiflora v1.1|Capsella grandiflora v1.1.jpg}} | ||
{{Main Plant|Capsella rubella v1.0|Capsella rubella v1.0.jpg}} | {{Main Plant|Capsella rubella v1.0|Capsella rubella v1.0.jpg}} | ||
{{Main Plant|Carica papaya ASGPBv0.4|Carica papaya ASGPBv0.4.jpg}} | {{Main Plant|Carica papaya ASGPBv0.4|Carica papaya ASGPBv0.4.jpg}} | ||
| − | {{Main Plant|Chlamydomonas reinhardtii v5.5|Chlamydomonas reinhardtii | + | {{Main Plant|Chlamydomonas reinhardtii v5.5|Chlamydomonas reinhardtii.jpg}} |
{{Main Plant|Citrus clementina v1.0|Citrus clementina v1.0.jpg}} | {{Main Plant|Citrus clementina v1.0|Citrus clementina v1.0.jpg}} | ||
{{Main Plant|Citrus sinensis v1.1|Citrus sinensis v1.1.jpg}} | {{Main Plant|Citrus sinensis v1.1|Citrus sinensis v1.1.jpg}} | ||
{{Main Plant|Coccomyxa subellipsoidea C-169 v2.0|Coccomyxa subellipsoidea C-169 v2.0.jpg}} | {{Main Plant|Coccomyxa subellipsoidea C-169 v2.0|Coccomyxa subellipsoidea C-169 v2.0.jpg}} | ||
| − | {{Main Plant|Cucumis sativus v1.0|Cucumis sativus | + | {{Main Plant|Cucumis sativus v1.0|Cucumis sativus.jpg}} |
{{Main Plant|Eucalyptus grandis v1.1|Eucalyptus grandis v1.1.jpg}} | {{Main Plant|Eucalyptus grandis v1.1|Eucalyptus grandis v1.1.jpg}} | ||
{{Main Plant|Eucalyptus grandis v2.0|Eucalyptus grandis v2.0.jpg}} | {{Main Plant|Eucalyptus grandis v2.0|Eucalyptus grandis v2.0.jpg}} | ||
{{Main Plant|Eutrema salsugineum v1.0|Eutrema salsugineum v1.0.jpg}} | {{Main Plant|Eutrema salsugineum v1.0|Eutrema salsugineum v1.0.jpg}} | ||
{{Main Plant|Fragaria vesca v1.1|Fragaria vesca v1.1.jpg}} | {{Main Plant|Fragaria vesca v1.1|Fragaria vesca v1.1.jpg}} | ||
| − | {{Main Plant|Glycine max Wm82.a2.v1|Glycine max | + | {{Main Plant|Glycine max Wm82.a2.v1|Glycine max.jpg}} |
{{Main Plant|Gossypium raimondii v2.1|Gossypium raimondii v2.1.jpg}} | {{Main Plant|Gossypium raimondii v2.1|Gossypium raimondii v2.1.jpg}} | ||
{{Main Plant|Kalanchoe laxiflora v1.0|Kalanchoe laxiflora v1.0.jpg}} | {{Main Plant|Kalanchoe laxiflora v1.0|Kalanchoe laxiflora v1.0.jpg}} | ||
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{{Main Plant|Mimulus guttatus v2.0|Mimulus guttatus v2.0.jpg}} | {{Main Plant|Mimulus guttatus v2.0|Mimulus guttatus v2.0.jpg}} | ||
{{Main Plant|Musa acuminata v1|Musa acuminata v1.jpg}} | {{Main Plant|Musa acuminata v1|Musa acuminata v1.jpg}} | ||
| − | {{Main Plant|Oryza sativa v7.0|Oryza sativa | + | {{Main Plant|Oryza sativa v7.0|Oryza sativa Japonica Group.jpg}} |
{{Main Plant|Ostreococcus lucimarinus v2.0|Ostreococcus lucimarinus v2.0.jpg}} | {{Main Plant|Ostreococcus lucimarinus v2.0|Ostreococcus lucimarinus v2.0.jpg}} | ||
{{Main Plant|Panicum hallii v2.0|Panicum hallii v2.0.jpg}} | {{Main Plant|Panicum hallii v2.0|Panicum hallii v2.0.jpg}} | ||
{{Main Plant|Panicum virgatum v1.1|Panicum virgatum v1.1.jpg}} | {{Main Plant|Panicum virgatum v1.1|Panicum virgatum v1.1.jpg}} | ||
{{Main Plant|Phaseolus vulgaris v1.0|Phaseolus vulgaris v1.0.jpg}} | {{Main Plant|Phaseolus vulgaris v1.0|Phaseolus vulgaris v1.0.jpg}} | ||
| − | |||
{{Main Plant|Physcomitrella patens v3.1|Physcomitrella patens v3.1.jpg}} | {{Main Plant|Physcomitrella patens v3.1|Physcomitrella patens v3.1.jpg}} | ||
{{Main Plant|Populus trichocarpa v3.0|Populus trichocarpa v3.0.jpg}} | {{Main Plant|Populus trichocarpa v3.0|Populus trichocarpa v3.0.jpg}} | ||
| − | + | {{Main Plant|Prunus persica v2.1|Prunus persica.jpg}} | |
| − | {{Main Plant|Prunus persica v2.1|Prunus persica | + | |
{{Main Plant|Ricinus communis v0.1|Ricinus communis v0.1.jpg}} | {{Main Plant|Ricinus communis v0.1|Ricinus communis v0.1.jpg}} | ||
{{Main Plant|Salix purpurea v1.0|Salix purpurea v1.0.jpg}} | {{Main Plant|Salix purpurea v1.0|Salix purpurea v1.0.jpg}} | ||
{{Main Plant|Selaginella moellendorffii v1.0|Selaginella moellendorffii v1.0.jpg}} | {{Main Plant|Selaginella moellendorffii v1.0|Selaginella moellendorffii v1.0.jpg}} | ||
{{Main Plant|Setaria italica v2.1|Setaria italica v2.1.jpg}} | {{Main Plant|Setaria italica v2.1|Setaria italica v2.1.jpg}} | ||
| − | {{Main Plant|Solanum lycopersicum iTAG2.3|Solanum lycopersicum | + | {{Main Plant|Solanum lycopersicum iTAG2.3|Solanum lycopersicum.jpg}} |
{{Main Plant|Solanum tuberosum v3.4|Solanum tuberosum v3.4.jpg}} | {{Main Plant|Solanum tuberosum v3.4|Solanum tuberosum v3.4.jpg}} | ||
{{Main Plant|Sorghum bicolor v2.1|Sorghum bicolor v2.1.jpg}} | {{Main Plant|Sorghum bicolor v2.1|Sorghum bicolor v2.1.jpg}} | ||
| Line 66: | Line 53: | ||
{{Main Plant|Theobroma cacao v1.1|Theobroma cacao v1.1.jpg}} | {{Main Plant|Theobroma cacao v1.1|Theobroma cacao v1.1.jpg}} | ||
{{Main Plant|Triticum aestivum v2.2|Triticum aestivum v2.2.jpg}} | {{Main Plant|Triticum aestivum v2.2|Triticum aestivum v2.2.jpg}} | ||
| − | {{Main Plant|Vitis vinifera Genoscope.12X|Vitis vinifera | + | {{Main Plant|Vitis vinifera Genoscope.12X|Vitis vinifera.jpg}} |
{{Main Plant|Volvox carteri v2.0|Volvox carteri v2.0.jpg}} | {{Main Plant|Volvox carteri v2.0|Volvox carteri v2.0.jpg}} | ||
| − | {{Main Plant|Zea mays 6a|Zea mays | + | {{Main Plant|Zea mays 6a|Zea mays.jpg}} |
</div> | </div> | ||
Revision as of 14:16, 15 September 2015
A database of plants lncRNAs
Long non-coding RNAs (lncRNAs) are functional non-translated molecules longer than 200 nucleotides with diverse roles, such as chromatin modifications, transcriptional regulation, and conformational changes in proteins. The Green Non-Coding Database (GreeNC) is a database of plant lncRNAs that provide information about sequence, expression levels, genomic context, and ontology of lncRNAs in plants.
Last news
Published on 21 November 2018 by Apaytuvi.
Welcome to the Green Non-Coding (GreeNC) database! GreeNC is the major resource of plant lncRNAs tod… Read more.
Published on 19 September 2016 by Apaytuvi.
A recent minor update has been incorporated. Change-log:
- lncRNAs containing undefined nucle… Read more.
All the news …
Statistics
| Species | Gene number | Transcript number | High confidence | Repetitive elements | miRNA precursors
|
|---|---|---|---|---|---|
| 5698 | 5698 | 4156 | 103 | 347 | |
| 3376 | 3376 | 1674 | 163 | 935 | |
| 4363 | 4363 | 2622 | 158 | 60 | |
| 2752 | 3008 | 1720 | 1018 | 63 | |
| 4828 | 5584 | 3648 | 870 | 1024 | |
| 1338 | 1394 | 1013 | 90 | 27 | |
| 1395 | 1458 | 1069 | 100 | 20 | |
| 3986 | 3987 | 2439 | 980 | 181 | |
| 583 | 619 | 135 | 217 | 450 | |
| 2056 | 2192 | 1553 | 149 | 34 | |
| 2344 | 2562 | 1788 | 171 | 42 | |
| 668 | 668 | 469 | 33 | 92 | |
| 1817 | 1929 | 1390 | 152 | 32 | |
| 4499 | 4639 | 3629 | 204 | 103 | |
| 1588 | 1669 | 1238 | 85 | 25 | |
| 3503 | 3503 | 2412 | 728 | 133 | |
| 5974 | 6689 | 4749 | 832 | 133 | |
| 3520 | 4216 | 3037 | 256 | 55 | |
| 2598 | 2598 | 1955 | 37 | 46 | |
| 4126 | 4126 | 2565 | 688 | 83 | |
| 3137 | 3468 | 2660 | 266 | 90 | |
| 9373 | 9676 | 5793 | 2567 | 286 | |
| 651 | 651 | 230 | 19 | 300 | |
| 351 | 351 | 199 | 6 | 48 | |
| 2169 | 2333 | 1591 | 186 | 59 | |
| 4071 | 4071 | 2525 | 170 | 90 | |
| 4995 | 5237 | 3601 | 1148 | 119 | |
| 501 | 501 | 209 | 9 | 128 | |
| 1838 | 1946 | 1450 | 152 | 30 | |
| 6888 | 9690 | 8390 | 907 | 299 | |
| 4997 | 5569 | 4111 | 434 | 124 | |
| 2803 | 3301 | 2216 | 526 | 85 | |
| 4198 | 4198 | 3127 | 174 | 215 | |
| 906 | 906 | 409 | 28 | 26 | |
| 3240 | 3492 | 2159 | 507 | 669 | |
| 3440 | 3440 | 2448 | 423 | 60 | |
| 5974 | 6680 | 2976 | 2682 | 184 | |
| 4624 | 5305 | 2682 | 1737 | 1057 | |
| 2111 | 2111 | 1536 | 86 | 174 | |
| 4137 | 4268 | 3306 | 461 | 59 | |
| 23359 | 38820 | 21132 | 5714 | 1039 | |
| 2526 | 2526 | 1624 | 296 | 23 | |
| 1097 | 1134 | 592 | 222 | 371 | |
| 16857 | 18110 | 10229 | 4004 | 2192 | |
| 1393 | 1393 | 1014 | 55 | 23 |