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Matches to external databases
The lncRNAs from GreeNC have been analysed against the following databases: SwissProt, miRBase, Rfam, RepBase (RepeatMasker), NONCODE, and lncRNAdb. This table displays any association with these databases.
| Transcript alias | Database | Version | Hit | Evalue |
|---|---|---|---|---|
| Acomosus_Aco010264.1 | miRBase | 21.0 | bdi-miR393a | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | ptc-miR393a-5p | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | mdm-miR393b | 8.0e-6 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | htu-miR393b | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | lus-miR393d | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | vvi-miR393b | 3.0e-5 |
| Acomosus_Aco010264.1 | Rfam | 11.0 | mir-944 | 9.2e-4 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | mes-miR393a | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | rco-miR393 | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | ata-miR393-5p | 1.0e-4 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | atr-miR393 | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | gma-miR393g | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | tcc-miR393b | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | mtr-miR393a | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | mdm-miR393a | 8.0e-6 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | htu-miR393a | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | lus-miR393c | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | bna-miR393 | 3.0e-5 |
| Acomosus_Aco010264.1 | RepBase (RepeatMasker) | 2014-01-31 | MuDR-5_VV | |
| Acomosus_Aco010264.1 | miRBase | 21.0 | cme-miR393c | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | zma-miR393b-5p | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | ppe-miR393a | 4.0e-4 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | cpa-miR393 | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | gma-miR393f | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | tcc-miR393a | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | sbi-miR393a | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | ghr-miR393 | 8.0e-6 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | gma-miR393k | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | lus-miR393b | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | mtr-miR393b-5p | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | mes-miR393d | 8.0e-6 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | cme-miR393b | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | sbi-miR393b | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | cca-miR393 | 1.0e-3 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | ppe-miR393b | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | gma-miR393e | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | csi-miR393 | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | osa-miR393a | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | zma-miR393c-5p | 8.0e-6 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | gma-miR393j | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | lus-miR393a | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | ptc-miR393c | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | mes-miR393c | 8.0e-6 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | cme-miR393a | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | gma-miR393d | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | vvi-miR393a | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | zma-miR393b-3p | 1.0e-3 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | stu-miR393-5p | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | aly-miR393b-5p | 3.0e-5 |
| Acomosus_Aco010264.1 | miRBase | 21.0 | ath-miR393b-5p | 3.0e-5 |