Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_estExt_fgenesh1_pm.C_30107 CsubellipsoideaC169_estExt_fgenesh1_pm.C_30107 |
scaffold_3 | 1247521 | 1249138 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_52602 CsubellipsoideaC169_52602 PAC:27390575 |
Low | Yes | 1345 | Get ORF Coding potential... Type: noncoding Potential: -0.764 Folding energies... MFEI: -37.390 AMFE: -0.718 GC content %: 52.045 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_52602 | SwissProt | 2015-06-01 | Q552P9 | 4.0e-8 |