Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Mesculenta_Manes.12G102400 Manes.12G102400 |
Chromosome12 | 21563372 | 21565369 | Phytozome | v6.1 | Manihot_esculenta | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Mesculenta_Manes.12G102400.1 Manes.12G102400.1 PAC:32345379 |
High | No | 1798 | Get ORF Coding potential... Type: noncoding Potential: -1.099 Folding energies... MFEI: -24.616 AMFE: -0.682 GC content %: 36.096 | |
Mesculenta_Manes.12G102400.2 Manes.12G102400.2 PAC:32345380 |
High | No | 1775 | Get ORF Coding potential... Type: noncoding Potential: -1.098 Folding energies... MFEI: -24.428 AMFE: -0.677 GC content %: 36.056 |