Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_18958 18958 |
scaffold_18 | 1554435 | 1554890 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_18958 18958 PAC:15404430 |
Low | No | 327 | Get ORF Coding potential... Type: noncoding Potential: -0.819 Folding energies... MFEI: -39.327 AMFE: -0.630 GC content %: 62.385 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_18958 | SwissProt | 2015-06-01 | Q86WV5 | 3.0e-6 |