Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_39161 39161 |
scaffold_30 | 363620 | 363902 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_39161 39161 PAC:15415801 |
Low | No | 225 | Get ORF Coding potential... Type: noncoding Potential: -0.450 Folding energies... MFEI: -26.889 AMFE: -0.531 GC content %: 50.667 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_39161 | SwissProt | 2015-06-01 | Q8VYI3 | 3.0e-17 |