Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_5BS_736E9D9B4 Traes_5BS_736E9D9B4 |
ta_iwgsc_5bs_v1_2269210 | 250 | 4915 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_5BS_736E9D9B4.1 Traes_5BS_736E9D9B4.1 PAC:31939332 |
High | No | 893 | Get ORF Coding potential... Type: noncoding Potential: -0.915 Folding energies... MFEI: -31.512 AMFE: -0.711 GC content %: 44.345 | |
Taestivum_Traes_5BS_736E9D9B4.2 Traes_5BS_736E9D9B4.2 PAC:31939331 |
High | No | 932 | Get ORF Coding potential... Type: noncoding Potential: -0.802 Folding energies... MFEI: -30.998 AMFE: -0.698 GC content %: 44.421 |