Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_6BS_C730D1DDD Traes_6BS_C730D1DDD |
ta_iwgsc_6bs_v1_2944964 | 5499 | 6521 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_6BS_C730D1DDD.1 Traes_6BS_C730D1DDD.1 PAC:31800504 |
Low | No | 288 | Get ORF Coding potential... Type: noncoding Potential: -0.810 Folding energies... MFEI: -27.639 AMFE: -0.612 GC content %: 45.139 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_6BS_C730D1DDD.1 | RepBase (RepeatMasker) | 2014-01-31 | L1-8_SBi |