Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c3_36980 Pp3c3_36980 |
Chr03 | 24794242 | 24794893 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c3_36980V3.1 Pp3c3_36980V3.1 PAC:32944455 |
High | No | 282 | Get ORF Coding potential... Type: noncoding Potential: -0.586 Folding energies... MFEI: -15.390 AMFE: -0.443 GC content %: 34.752 | |
Ppatens_Pp3c3_36980V3.2 Pp3c3_36980V3.2 PAC:32944456 |
High | No | 565 | Get ORF Coding potential... Type: noncoding Potential: -0.752 Folding energies... MFEI: -16.885 AMFE: -0.497 GC content %: 33.982 |