Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ahalleri_Araha.3105s0039 Araha.3105s0039 |
Scaffold3105 | 148099 | 149723 | Phytozome | [[Species:|]]"Species:" cannot be used as a page name in this wiki. | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ahalleri_Araha.3105s0039.1 Araha.3105s0039.1 PAC:28860483 |
Low | No | 261 | Get ORF Coding potential... Type: coding Potential: 0.286 Folding energies... MFEI: -15.115 AMFE: -0.349 GC content %: 43.295 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ahalleri_Araha.3105s0039.1 | RepBase (RepeatMasker) | 2014-01-31 | (GAA)n |