Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Stuberosum_PGSC0003DMG400023269 PGSC0003DMG400023269 |
chr10 | 22029656 | 22030141 | Phytozome | v3.4 | Solanum_tuberosum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Stuberosum_PGSC0003DMT400059829 PGSC0003DMT400059829 PAC:24411957 |
Low | No | 486 | Get ORF Coding potential... Type: noncoding Potential: -1.013 Folding energies... MFEI: -20.535 AMFE: -0.652 GC content %: 31.481 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Stuberosum_PGSC0003DMT400059829 | RepBase (RepeatMasker) | 2014-01-31 | TLP1 |