Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3B_D79AEA2BF Traes_3B_D79AEA2BF |
ta_iwgsc_3b_v1_10433602 | 3065 | 7690 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3B_D79AEA2BF.1 Traes_3B_D79AEA2BF.1 PAC:31950580 |
High | No | 792 | Get ORF Coding potential... Type: noncoding Potential: -0.673 Folding energies... MFEI: -26.566 AMFE: -0.636 GC content %: 41.793 | |
Taestivum_Traes_3B_D79AEA2BF.2 Traes_3B_D79AEA2BF.2 PAC:31950581 |
High | No | 894 | Get ORF Coding potential... Type: noncoding Potential: -0.722 Folding energies... MFEI: -25.380 AMFE: -0.620 GC content %: 40.940 | |
Taestivum_Traes_3B_D79AEA2BF.3 Traes_3B_D79AEA2BF.3 PAC:31950582 |
High | No | 1356 | Get ORF Coding potential... Type: noncoding Potential: -0.901 Folding energies... MFEI: -24.086 AMFE: -0.634 GC content %: 37.979 |