Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_4BS_2D77B97EE Traes_4BS_2D77B97EE |
ta_iwgsc_4bs_v1_4939718 | 495 | 2871 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_4BS_2D77B97EE.2 Traes_4BS_2D77B97EE.2 PAC:31958659 |
Low | No | 432 | Get ORF Coding potential... Type: noncoding Potential: -0.525 Folding energies... MFEI: -31.713 AMFE: -0.710 GC content %: 44.676 | |
Taestivum_Traes_4BS_2D77B97EE.3 Traes_4BS_2D77B97EE.3 PAC:31958660 |
Low | No | 620 | Get ORF Coding potential... Type: noncoding Potential: -0.489 Folding energies... MFEI: -27.500 AMFE: -0.669 GC content %: 41.129 | |
Taestivum_Traes_4BS_2D77B97EE.4 Traes_4BS_2D77B97EE.4 PAC:31958661 |
Low | No | 440 | Get ORF Coding potential... Type: noncoding Potential: -0.530 Folding energies... MFEI: -29.682 AMFE: -0.684 GC content %: 43.409 | |
Taestivum_Traes_4BS_2D77B97EE.5 Traes_4BS_2D77B97EE.5 PAC:31958662 |
High | No | 436 | Get ORF Coding potential... Type: noncoding Potential: -0.728 Folding energies... MFEI: -28.761 AMFE: -0.630 GC content %: 45.642 |