Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Bdistachyon_Bradi1g02615 Bradi1g02615 |
Bd1 | 1749228 | 1761138 | Phytozome | v3.1 | Brachypodium_distachyon | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Bdistachyon_Bradi1g02615.1 Bradi1g02615.1 PAC:32802236 |
High | No | 1486 | Get ORF Coding potential... Type: noncoding Potential: -0.994 Folding energies... MFEI: -29.058 AMFE: -0.646 GC content %: 44.953 | |
Bdistachyon_Bradi1g02615.2 Bradi1g02615.2 PAC:32802237 |
High | No | 842 | Get ORF Coding potential... Type: noncoding Potential: -0.931 Folding energies... MFEI: -26.295 AMFE: -0.605 GC content %: 43.468 |