Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Cclementina_Ciclev10023184m.g Ciclev10023184m.g |
scaffold_3 | 2942913 | 2944293 | Phytozome | v1.0 | Citrus_clementina | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Cclementina_Ciclev10023179m Ciclev10023179m PAC:20807836 |
High | No | 705 | Get ORF Coding potential... Type: noncoding Potential: -0.023 Folding energies... MFEI: -25.433 AMFE: -0.640 GC content %: 39.716 | |
Cclementina_Ciclev10023182m Ciclev10023182m PAC:20807837 |
High | No | 704 | Get ORF Coding potential... Type: noncoding Potential: -0.025 Folding energies... MFEI: -25.398 AMFE: -0.632 GC content %: 40.199 | |
Cclementina_Ciclev10023184m Ciclev10023184m PAC:20807835 |
High | No | 724 | Get ORF Coding potential... Type: noncoding Potential: -0.031 Folding energies... MFEI: -25.552 AMFE: -0.642 GC content %: 39.779 | |
Cclementina_Ciclev10023185m Ciclev10023185m PAC:20807838 |
High | No | 765 | Get ORF Coding potential... Type: noncoding Potential: -0.044 Folding energies... MFEI: -24.471 AMFE: -0.641 GC content %: 38.170 |