Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Csinensis_orange1.1g034294m.g orange1.1g034294m.g |
scaffold00482 | 73044 | 75889 | Phytozome | v1.1 | Citrus_sinensis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Csinensis_orange1.1g034294m orange1.1g034294m PAC:18117745 |
High | No | 505 | Get ORF Coding potential... Type: noncoding Potential: -0.595 Folding energies... MFEI: -25.386 AMFE: -0.602 GC content %: 42.178 | |
Csinensis_orange1.1g034311m orange1.1g034311m PAC:18117747 |
High | No | 678 | Get ORF Coding potential... Type: noncoding Potential: -0.740 Folding energies... MFEI: -26.549 AMFE: -0.621 GC content %: 42.773 | |
Csinensis_orange1.1g034325m orange1.1g034325m PAC:18117746 |
High | No | 596 | Get ORF Coding potential... Type: noncoding Potential: -0.703 Folding energies... MFEI: -27.181 AMFE: -0.628 GC content %: 43.289 |