Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Csinensis_orange1.1g034604m.g orange1.1g034604m.g |
scaffold00001 | 71057 | 73704 | Phytozome | v1.1 | Citrus_sinensis | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Csinensis_orange1.1g034604m orange1.1g034604m PAC:18137368 |
High | No | 2494 | Get ORF Coding potential... Type: noncoding Potential: -0.980 Folding energies... MFEI: -23.340 AMFE: -0.632 GC content %: 36.929 | |
Csinensis_orange1.1g034608m orange1.1g034608m PAC:18137369 |
High | No | 1277 | Get ORF Coding potential... Type: noncoding Potential: -0.885 Folding energies... MFEI: -25.043 AMFE: -0.628 GC content %: 39.859 | |
Csinensis_orange1.1g034613m orange1.1g034613m PAC:18137370 |
High | No | 2535 | Get ORF Coding potential... Type: noncoding Potential: -0.981 Folding energies... MFEI: -23.148 AMFE: -0.625 GC content %: 37.041 |