Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_Genemark1.4730_g CsubellipsoideaC169_Genemark1.4730_g |
scaffold_9 | 1362361 | 1363357 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_63947 CsubellipsoideaC169_63947 PAC:27388487 |
Low | No | 249 | Get ORF Coding potential... Type: noncoding Potential: -0.708 Folding energies... MFEI: -42.169 AMFE: -0.636 GC content %: 66.265 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_63947 | RepBase (RepeatMasker) | 2014-01-31 | ZEPP |