Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Macuminata_GSMUA_Achr1G01800_001 GSMUA_Achr1G01800_001 |
chr1 | 1475076 | 1475336 | Phytozome | v1 | Musa_acuminata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Macuminata_GSMUA_Achr1T01800_001 GSMUA_Achr1T01800_001 PAC:32313282 |
Low | No | 261 | Get ORF Coding potential... Type: noncoding Potential: -0.440 Folding energies... MFEI: -15.824 AMFE: -0.449 GC content %: 35.249 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Macuminata_GSMUA_Achr1T01800_001 | SwissProt | 2015-06-01 | A4QJK6 | 4.0e-12 |