Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c24_20280 Pp3c24_20280 |
Chr24 | 13382367 | 13382962 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c24_20280V3.1 Pp3c24_20280V3.1 PAC:32909224 |
High | No | 213 | Get ORF Coding potential... Type: noncoding Potential: -1.151 Folding energies... MFEI: -30.610 AMFE: -0.639 GC content %: 47.887 | |
Ppatens_Pp3c24_20280V3.2 Pp3c24_20280V3.2 PAC:32909225 |
High | No | 596 | Get ORF Coding potential... Type: noncoding Potential: -1.171 Folding energies... MFEI: -27.836 AMFE: -0.599 GC content %: 46.477 |