Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_123957 123957 |
scaffold_73 | 418885 | 419284 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_123957 123957 PAC:15404874 |
Low | No | 342 | Get ORF Coding potential... Type: noncoding Potential: -0.480 Folding energies... MFEI: -27.953 AMFE: -0.559 GC content %: 50.000 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_123957 | SwissProt | 2015-06-01 | Q32PP1 | 3.0e-8 |