Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_138198 138198 |
scaffold_185 | 75891 | 76139 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_138198 138198 PAC:15420748 |
Low | No | 249 | Get ORF Coding potential... Type: noncoding Potential: -0.631 Folding energies... MFEI: -20.161 AMFE: -0.465 GC content %: 43.373 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_138198 | SwissProt | 2015-06-01 | P86181 | 5.0e-11 |