Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_166148 166148 |
scaffold_3 | 3112035 | 3112624 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_166148 166148 PAC:15414172 |
Low | No | 447 | Get ORF Coding potential... Type: noncoding Potential: -0.044 Folding energies... MFEI: -33.937 AMFE: -0.637 GC content %: 53.244 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_166148 | SwissProt | 2015-06-01 | Q42377 | 1.0e-5 |