Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_19170 19170 |
scaffold_29 | 1072169 | 1072384 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_19170 19170 PAC:15401347 |
Low | No | 216 | Get ORF Coding potential... Type: noncoding Potential: -1.110 Folding energies... MFEI: -15.139 AMFE: -0.667 GC content %: 22.685 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_19170 | SwissProt | 2015-06-01 | P30617 | 9.0e-7 |